Pseudomonas syringae pv. tomato DC3000: PSPTO_5241
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Entry
PSPTO_5241 CDS
T00118
Symbol
ubiD
Name
(GenBank) 3-octaprenyl-4-hydroxybenzoate carboxy-lyase
KO
K03182
4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:
4.1.1.98
]
Organism
pst
Pseudomonas syringae pv. tomato DC3000
Pathway
pst00130
Ubiquinone and other terpenoid-quinone biosynthesis
pst01100
Metabolic pathways
pst01110
Biosynthesis of secondary metabolites
pst01240
Biosynthesis of cofactors
Module
pst_M00117
Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol
Brite
KEGG Orthology (KO) [BR:
pst00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
PSPTO_5241 (ubiD)
Enzymes [BR:
pst01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.98 4-hydroxy-3-polyprenylbenzoate decarboxylase
PSPTO_5241 (ubiD)
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Gene cluster
GFIT
Motif
Pfam:
UbiD
UbiD_C
UbiD_N
Motif
Other DBs
NCBI-ProteinID:
AAO58667
UniProt:
Q87UQ5
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All DBs
Position
complement(5960058..5961524)
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AA seq
488 aa
AA seq
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MKFKDLRDFVQQLEQRGELKRIQMPISPVLEMTEICDRTLRAKGPALLFENPVGFDIPVL
GNLFGTPERVAMGMGAEAVTELREIGKLLAFLKEPEPPKGLKDAWSKLPIFRKVIAMAPK
VVKDAPCQEIVIEGDDVDLGMLPVQTCWPGDVAPLITWGLTVTKGPNKERQNLGIYRQQV
IGRNKIIMRWLSHRGGALDFRDWCVKHPGEPYPVAVALGADPATILGAVTPVPDSLSEYA
FAGLLRGSRTELIKCRGSNLQVPASAEIVLEGVIHPGEMANEGPYGDHTGYYNEVDSFPV
LTVERITHRIKPIYHSTYTGRPPDEPAILGVALNEVFVPILQKQFPEIVDFYLPPEGCSY
RMAVVTIKKQYPGHAKRVMLGVWSFLRQFMYTKFVIVTDDDINARDWNDVIWAITTRMDP
KRDTVMIDNTPIDYLDFASPVSGLGSKMGLDATNKWPGETTREWGRAIVKDEATTRRVDE
IWTQLGID
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcaaagatctaagggatttcgtgcagcagttggagcagcgcggagagttgaaa
cgcattcagatgccgatctcgcctgtgctggaaatgactgaaatctgtgaccgtaccttg
cgcgccaaaggcccggccctgctgtttgaaaacccggttggctttgatattccggtgctg
ggcaacctgttcggcacgccggagcgcgtggccatgggcatgggcgcggaagccgtcacc
gagctgcgcgaaatcggcaagttgcttgcgtttctcaaggagcccgagccgcccaaaggc
ctgaaagatgcctggtccaagctgcccatcttccgcaaagtcatcgccatggcgcccaag
gtcgtcaaggatgcaccctgccaggagatcgtcatcgagggtgatgacgtcgatctcggc
atgttgccggtgcagacctgctggccgggcgatgtcgcgccgctgatcacctggggcctg
accgtgaccaaaggcccgaacaaggagcggcagaacctcggtatttatcgccagcaggtc
atcggccgcaacaagatcatcatgcgctggctcagccatcgcggtggcgcgcttgacttc
cgcgactggtgcgtcaagcatcctggcgagccttatccggtggccgtcgcactgggcgcg
gacccggcgaccattctcggtgccgtgacgccggtgcccgacagcctgtccgaatacgcc
ttcgccgggctactgcgtggctcgcgcaccgagctgatcaagtgccgtggcagcaacctg
caagtgccagccagtgccgaaatcgtgcttgagggcgtgattcatccgggcgagatggcc
aacgaaggcccctacggcgatcacaccggttattacaacgaagtcgacagctttccggtg
ctcaccgtcgagcgcatcacccaccgcatcaagccgatctaccacagcacctacaccggg
cgtccaccggacgagccggctatcctgggtgtggcgctgaacgaagtgttcgtgccgatt
ctgcagaagcagtttccggaaatcgtcgatttctacctgccgcccgaggggtgctcttac
cgcatggcggtggtgactatcaagaaacagtaccccggccatgccaagcgcgtgatgctg
ggcgtctggtcgttcctgcgccagtttatgtacaccaaatttgtgatcgtcaccgatgac
gacatcaatgcgcgtgactggaatgacgtgatctgggccatcaccacccgcatggacccc
aagcgcgacacggtcatgatcgacaacacgcccatcgattacctcgattttgcctctccg
gtgtctggattgggatcaaaaatgggcctggatgccactaacaaatggccaggggaaacc
acccgcgaatggggcagggcgatcgtcaaggacgaagccaccacgcgccgggtggacgag
atctggactcagttgggaatagactga
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