Pseudomonas syringae pv. tomato DC3000: PSPTO_5285
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Entry
PSPTO_5285 CDS
T00118
Name
(GenBank) mutT/nudix family protein
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
pst
Pseudomonas syringae pv. tomato DC3000
Pathway
pst03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pst00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PSPTO_5285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pst03019
]
PSPTO_5285
Messenger RNA biogenesis [BR:
pst03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
PSPTO_5285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Nudt16-like
NUDIX_2
Motif
Other DBs
NCBI-ProteinID:
AAO58711
UniProt:
Q87UL1
LinkDB
All DBs
Position
complement(6011469..6011948)
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AA seq
159 aa
AA seq
DB search
MIDPDGFRPNVGIILTNDAGQVLWARRINQDAWQFPQGGINPQETPEDALYRELNEEVGL
ERHDVQILACTRGWLRYRLPQRLVRTHSQPLCIGQKQKWFLLRLISNEQRVRMDLTGKPE
FDGWRWVSYWYPLGQVVTFKREVYRRALKELAPRLLSRD
NT seq
480 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgaccccgatggtttccgtcctaatgtcgggattattctgacaaacgatgctggt
caggtcctatgggctcgacgtattaaccaggatgcctggcagtttccccagggtggaatc
aacccgcaggagacgcctgaagacgcgctttatcgtgaattgaacgaagaagtcgggctt
gaacggcatgatgtgcaaatacttgcctgcactcggggctggttgcgttatcgtctgccg
caacgattggtccgtacgcacagccagccgctgtgtatcggccagaagcaaaaatggttt
ctcctgcgcctgatctccaacgagcagcgggtgcggatggatttgaccggcaaaccggag
ttcgatggctggcgctgggtcagttattggtatccgttgggccaggtggtgacattcaag
cgcgaggtgtatcgacgcgcactcaaagagcttgccccgcgcctgttatcgcgcgactga
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