KEGG   Pseudomonas syringae pv. tomato DC3000: PSPTO_5415
Entry
PSPTO_5415        CDS       T00118                                 
Name
(GenBank) Rhs element Vgr protein
  KO
K11904  type VI secretion system secreted protein VgrG
Organism
pst  Pseudomonas syringae pv. tomato DC3000
Pathway
pst03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pst00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    PSPTO_5415
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pst02044]
    PSPTO_5415
Secretion system [BR:pst02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   PSPTO_5415
SSDB
Motif
Pfam: Phage_GPD Gp5_trimer_C Phage_base_V DUF2345 DUF6484 DUF1088
Other DBs
NCBI-ProteinID: AAO58837
UniProt: Q87U92
LinkDB
Position
complement(6153553..6155589)
AA seq 678 aa
MFNPSNETHFSLTVKDFSGDLQVLSFTGTEGISQPFSFDLELVSENPDIDLETLLHKQAF
LAFDPQGNGIHGQIYRVAQGDAGKRLTRYTLSLVPQLQYLHHRTNQRIYQQMSAQQIIAL
ILEEHGIKSNGYSFQLGQPCPARDYCVQYDETDLHFVQRLCEEEGVHYHFQHSQEGHVLV
FGDDQTVFPKLSGPTAYVQGSGLVADVPVIKGFQLRLETRTGRVTRRDYDFEKPKLQLEA
AYKPANESNEPDLEDYDYPGRFVDRARGKFLSQRALERHRADYQQAEGWGDQTALKSGHF
LPLSEHPRAEWNDLWLLTEIVHEGKQPQVLEESVTSDTTNNKDDFHHGYRNRFLATPWAV
LYRPALNHPKPRVLGSQTAVVTGPKGEEIHCDQYGRVKVQFFWDREGLADDKTSCWLRVS
SGWAGDRYGGISIPRVGMEVLVSFLEGDPDQPLVTGCLYHKENQVPYPLPTNKTRTVFKT
FSSPGGGGYNELRIEDKKGAEQIFIHAQRDWDENIENDQKIRVGNERHDTVEKNTYTELK
AEEHRTTHADRKTEVRMDDHLTVAQNQHVKLGTAQLTSAGTEIHLKAGEKIVIEAGVELT
VKAGGSFIKLDAGGITMIGPIANVNAGGSAGTGTGIGIKPPRLPGVVDQDKAGSLMDPAL
VNAPPEKVEPKAVFVFSE
NT seq 2037 nt   +upstreamnt  +downstreamnt
atgttcaatccttctaacgaaacgcacttcagtctgaccgtcaaagatttttcaggcgac
ctgcaagtgttgtcgtttacaggtactgaaggcatcagccaaccgttcagtttcgacctg
gagctggtcagcgaaaaccccgacatcgatctggagacgcttttgcacaagcaggcgttt
ctggcgttcgatccccaggggaatggcatccacgggcagatctaccgcgttgcccaaggc
gacgctggcaagcgcctgacgcgttacaccctgtctttggtaccgcagttgcagtacctg
catcatcgtaccaaccagcgtatctatcagcagatgtcggcgcagcaaatcatcgcgctg
atcctggaagagcatggcatcaagagtaacggctacagctttcagctcggccagccatgc
ccggcgcgcgattactgcgtgcaatacgatgaaaccgatctgcacttcgtccagaggctg
tgcgaggaagagggggttcactaccacttccagcacagccaggaagggcatgtgctggtc
ttcggcgatgaccaaacggtcttccccaagctgagtgggcccacggcgtatgtgcaaggc
agcggcctggtcgctgacgtgccggtcatcaagggattccaactgcgtctggaaacccgc
acaggccgtgtgacccgacgcgactacgacttcgagaagccgaaactgcaacttgaagcc
gcttacaaacctgccaacgaaagtaacgagccggacctggaggattatgactacccaggc
cgcttcgtcgatcgcgcgcggggcaagttcctcagccagcgtgcgctggaacgtcatcgt
gccgattatcagcaagccgaaggctggggcgatcagaccgcgctcaagagtgggcatttt
cttccgttatccgagcaccctcgcgcggagtggaacgacttgtggctgctgactgaaatc
gtccatgaaggcaaacagccgcaagtgttggaagagtcggtcactagcgacaccaccaac
aacaaggacgacttccaccacggctatcgcaaccgattcctggcaaccccgtgggcggtt
ttatatcgcccggcgctgaaccaccccaagcctcgggtactcggcagccaaaccgccgtg
gtcaccggccccaagggtgaagaaatccactgcgaccagtatggccgcgtgaaagtgcag
tttttctgggaccgcgaaggcctggccgatgacaagaccagttgctggctgcgcgtctcc
agcgggtgggcgggcgaccgctacggcggcatcagcatcccgcgcgtaggtatggaagtg
ctggtgtcattccttgagggcgacccggaccaaccgctggtgaccggctgcctgtaccac
aaggaaaaccaggtgccgtacccgctgccgaccaacaagacccgcacagtattcaagacc
ttcagttcccctggcggtggcggctacaacgaactgcgcatcgaagataaaaaaggcgcc
gaacagattttcatccatgcccagcgggactgggacgaaaacatcgaaaacgaccagaaa
atccgcgttggcaacgaacgccacgacacggtcgaaaagaacacctacaccgagctgaaa
gccgaagaacaccgcaccacccacgccgaccgcaagaccgaagtccgcatggacgaccac
ctgacggttgcgcagaaccagcacgtgaaactgggcaccgcgcaactgaccagcgcaggc
accgagattcacttgaaggcgggcgaaaagattgttatcgaggcgggcgtggagctcacc
gtgaaggcgggcgggagcttcatcaagctcgacgcgggcgggataaccatgatcggtccg
atcgcgaacgtcaacgctggaggctccgccggaaccggcaccgggattggcatcaagccg
cctagattgccgggggttgtggatcaggacaaggcggggagtttgatggatccggcgttg
gtgaatgcaccgcctgagaaagttgaaccgaaggctgtttttgtgttttctgagtga

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