Pseudomonas syringae pv. tomato DC3000: PSPTO_5432
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Entry
PSPTO_5432 CDS
T00118
Name
(GenBank) conserved protein of unknown function
KO
K11900
type VI secretion system protein ImpC
Organism
pst
Pseudomonas syringae pv. tomato DC3000
Pathway
pst02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pst00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PSPTO_5432
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pst02044
]
PSPTO_5432
Secretion system [BR:
pst02044
]
Type VI secretion system
Imp/Vas secretion system core components
PSPTO_5432
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VipB
VipB_2
VMAP-M0
Motif
Other DBs
NCBI-ProteinID:
AAO58854
UniProt:
Q87U76
LinkDB
All DBs
Position
complement(6176718..6178196)
Genome browser
AA seq
492 aa
AA seq
DB search
MPSNSSAKQKSVETSEHSILDSIIAQTSLTRDDEAYDIAKRGVSAFIEELLKPQNNGEPV
KKAMVDRMIAEIDAKLSRQMDEILHHPDFQSLESSWRGLQLLVDRTNFRENIKIEILNVS
KDDLLEDFEDSPEVMQSGLYKHIYTAEYGQFGGQPVGAIIANYFMSPSSPDVKLMQYVSS
VACMSHAPFIAAAGPKFFGLESFTGLPDLKDLKDHFEGPQFAKWQSFRQSEDSRYVGLTV
PRFLLRNPYDPQENPVKSFVYKETVANSHEHYLWGNTAYAFGTKLTDSFAKFRWCPNIIG
PQSGGAVEDLPLHHFESMGEIETKIPTEVLVSDRREYELAEEGFISLTMRKGSDNAAFFS
ASSVQKPKFFGNSAEGKAAELNYKLGTQLPYMMIVNRLAHYLKVLQREQLGSWKERTDLE
LELNKWIRQYVADQENPSAEVRGRRPLRAAQITVSDVEGEPGWYRVSLNVRPHFKYMGAD
FTLSLVGKLDKE
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgccaagcaatagctcagcaaagcaaaaaagcgttgagacaagcgaacacagtattctc
gacagcatcattgcccagaccagtctgacgcgtgacgacgaagcctatgacatcgccaag
cgtggcgtatcggccttcattgaagagctgctaaagccgcagaacaacggtgagccggtc
aagaaggcaatggtcgaccgcatgatcgccgagatcgatgccaagctcagccgccagatg
gacgaaatcctgcaccacccagacttccagtccctggaatcgtcgtggcgtggcctgcag
ttgttggtcgatcgcaccaacttccgtgaaaacatcaagatcgaaatcctcaacgtctcc
aaagatgatttgctggaagacttcgaagactcgccggaagtgatgcagtcgggcctgtac
aagcacatctacaccgcagaatacggccagttcggtggtcagccagtgggcgcgatcatc
gccaactacttcatgtctccaagctcgcctgacgtgaaactcatgcagtacgtatctagc
gtagcctgcatgtctcatgcaccgttcattgctgctgccggcccgaaattcttcggtctg
gagagcttcactggcttgccggacctgaaagatctgaaggatcacttcgaaggcccgcag
ttcgcaaaatggcagagcttccgccagtcggaagattcccgttacgtcggcctgaccgtt
ccgcgcttcttgctgcgcaatccgtacgacccgcaggaaaaccccgtcaagtcattcgtg
tacaaggaaaccgtcgccaacagccacgagcattatctgtggggcaacacggcttacgcg
ttcggcaccaagctgaccgacagtttcgccaagttccgctggtgcccgaacatcatcggc
ccgcagagcggcggtgcagttgaagacctgccgttgcaccatttcgaaagcatgggcgaa
atcgagaccaagatccctaccgaggttctggtcagcgaccgtcgtgaatacgaactggct
gaggaaggcttcatctccctgaccatgcgtaagggcagcgacaacgcggcgttcttctcc
gccagttccgtgcagaagccgaagttcttcggtaacagcgctgaaggcaaggctgcagag
ctgaactacaagctgggcacccagctgccgtacatgatgatcgtcaaccgcctggctcac
tacttgaaagtgctgcagcgcgagcaactcggttcgtggaaagagcgtaccgatctcgag
ctggaactgaacaagtggatccgccagtacgtcgcagatcaggagaacccgagcgccgaa
gtgcgcggccgtcgcccgttgcgcgctgcccagattaccgtcagcgacgtcgaaggtgaa
cctggctggtaccgcgtcagcctgaacgtgcgcccgcacttcaaatacatgggtgctgat
ttcaccctgtcgctggttggcaagctggacaaagagtaa
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