Pseudomonas syringae pv. tomato DC3000: PSPTO_5461
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Entry
PSPTO_5461 CDS
T00118
Name
(GenBank) acyl-CoA dehydrogenase, putative
KO
K00252
glutaryl-CoA dehydrogenase [EC:
1.3.8.6
]
Organism
pst
Pseudomonas syringae pv. tomato DC3000
Pathway
pst00071
Fatty acid degradation
pst00310
Lysine degradation
pst00362
Benzoate degradation
pst00380
Tryptophan metabolism
pst01100
Metabolic pathways
pst01110
Biosynthesis of secondary metabolites
pst01120
Microbial metabolism in diverse environments
Module
pst_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pst00001
]
09100 Metabolism
09103 Lipid metabolism
00071 Fatty acid degradation
PSPTO_5461
09105 Amino acid metabolism
00310 Lysine degradation
PSPTO_5461
00380 Tryptophan metabolism
PSPTO_5461
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
PSPTO_5461
Enzymes [BR:
pst01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.8 With a flavin as acceptor
1.3.8.6 glutaryl-CoA dehydrogenase (ETF)
PSPTO_5461
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Gene cluster
GFIT
Motif
Pfam:
Acyl-CoA_dh_N
Acyl-CoA_dh_1
Acyl-CoA_dh_M
Acyl-CoA_dh_2
ACOX_C_alpha1
Motif
Other DBs
NCBI-ProteinID:
AAO58881
UniProt:
Q87U53
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Position
complement(6220971..6222152)
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AA seq
393 aa
AA seq
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MSGEASFNWIDPLLLDQQLSEEERMVRDTAEQFAQGKLAPRVLEAFRHEKTDPDIFREMG
EVGLLGATIPEEFGGSGLNYVCYGLIAREVERVDSGYRSMMSVQSSLVMVPINEFGTQAQ
KEKYLPKLASGEWIGCFGLTEPNHGSDPGAMITRARSVEGGYRLSGSKMWITNSPIADVF
VVWAKDDAGDIRGFVLEKGWAGLSAPVIHGKVGLRASITGEIVMDNVFVPEENIFPDVRG
LKGPFTCLNSARYGISWGALGAAEFCWHTARQYTLDRQQFGRPLAANQLIQKKLADMQTE
ITLALQGCLRLGRMKDEGIAAVEITSIMKRNSCGKSLDIARMARDMLGGNGISDEFGIAR
HLVNLEVVNTYEGTHDVHALILGRAQTGIQAFY
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgagcggtgaagcgagctttaactggatcgacccattgttgctggatcaacagctttct
gaagaagagcgcatggttcgcgacactgccgagcagttcgcccagggcaagcttgcgccg
cgtgtgctggaagcgtttcgtcacgagaaaaccgacccggacatctttcgcgagatgggt
gaagtggggctgctgggtgcgaccatccctgaagagttcggcggcagtggcttgaattac
gtctgctacgggctgatcgctcgcgaagtagagcgcgttgactcgggctatcgttcgatg
atgagtgtgcagtcctcactggtcatggtgccgatcaatgaattcggcacgcaggcccag
aaagagaaatacctgcccaaactggcgtctggcgagtggatcggctgctttggcctgacc
gagcccaatcacggctccgaccctggcgcgatgatcacccgggcaaggagtgtcgaaggc
ggttatcgcctgagcggcagcaagatgtggatcaccaacagtccgatcgcggacgtgttc
gtggtgtgggccaaggacgacgctggagatattcgcggtttcgttcttgaaaaaggctgg
gcggggctgagtgctccggtcattcatggcaaggtcggtttgcgcgcgtcaatcaccggc
gagatcgtcatggacaatgtgttcgtgcccgaagaaaacatcttcccggacgtgcgcggt
ctcaaaggtccttttacctgccttaattcggcacgctacggtatttcctggggtgcgctg
ggtgcggctgaattctgctggcacaccgctcggcaatacacccttgatcgtcagcagttt
ggccgtccgctggcagccaatcagttgatccagaaaaagctcgcagacatgcagaccgag
atcaccctggcgctgcaaggctgtctgcgactggggcgcatgaaagacgaaggcattgca
gcggtggaaatcacctcgatcatgaagcgcaactcctgcggcaaatctctggatatcgcg
cgcatggctcgcgacatgctgggcgggaacgggatttccgacgaattcggcattgcgcgc
catctggtcaatctggaagtggtgaatacgtatgaagggacgcatgacgttcatgcgttg
atcctggggcgagcgcagaccggtattcaggctttctattaa
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