Pseudomonas syringae pv. tomato DC3000: PSPTO_5504
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Entry
PSPTO_5504 CDS
T00118
Name
(GenBank) transcriptional regulator, GntR family
KO
K00375
GntR family transcriptional regulator / MocR family aminotransferase
Organism
pst
Pseudomonas syringae pv. tomato DC3000
Brite
KEGG Orthology (KO) [BR:
pst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pst03000
]
PSPTO_5504
Transcription factors [BR:
pst03000
]
Prokaryotic type
Helix-turn-helix
GntR family
PSPTO_5504
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
GntR
HTH_Crp_2
OB_DEPS-1_3rd
HTH_24
MarR
Motif
Other DBs
NCBI-ProteinID:
AAO58923
UniProt:
Q87U11
LinkDB
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Position
complement(6270147..6271709)
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AA seq
520 aa
AA seq
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MPADRVAFPPTLIGIELDPRQGLSKQLYEILRRQILDGRLSSGMRLPASRDLAKSLAISR
NSVMRAFDQLYAEGFIEGRVGDGTYVAQLAGRHAALQRNAPGKLSTNLPTGLHTGLCTGL
STFAVENTQNLLNQVIHNPALQRVEKHHLNEPPDDRPKAFRVGVPAFDLFPFALWGKLYA
SFWRKPNLDQLGYGAAAGEWRLRELVAAYLRSSRGLGCTAEQIVITSGAQHAISLCAQLL
VTPGEGVAVENPGYRAAGHAFALAGARLQGVAVDSEGMRCADLEQTDCRLAYVTPSHQYP
TGVVMSLARRLELLAWAEKNQSWIVEDDYDGEYRYSGSPLAPLAALDQNGRVLYVGTFGK
IVFPALRLGYLVLPEHLVRPFSQRKAVDMRHTEIGVQAVMAQFIAQGHFQRHIRRMRRAA
LSRRDALLAGWPDNVPGCAAMPKVVAGLHVMVKVDSVAREQALIAKARSVGVEMSPLSGY
WLSDSDEPVDNRAGLVLGFAAVPEPAIADALNRLRMVWSE
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgccggcagaccgcgttgcgtttccacccacgcttatcggtatcgaactggacccacgc
caaggtcttagcaagcagctgtatgaaattctgcgtcggcaaatcctcgacggacgcctg
agcagcggcatgcgcctgcctgccagccgggatctggcaaaatcgctggcgatttctcgc
aacagcgtgatgcgcgccttcgatcagctatacgccgaaggtttcattgaagggcgcgtt
ggcgatggcacatacgtcgcgcaactggccggacgtcacgctgcgcttcagcgcaatgct
cccggaaaactatccaccaacttacccacaggtttgcacacagggttatgcacaggtttg
tccacatttgcggttgaaaacacgcagaatctgctgaatcaagttatccacaaccccgcg
ctgcaacgggttgaaaagcaccacctcaatgagcccccggatgaccggcccaaggccttt
agggtcggggttcccgcgtttgaccttttcccgttcgccttgtggggcaagctgtatgcg
tctttttggcgcaagccaaatctcgatcaactgggctatggcgctgcggcgggagagtgg
cggctgcgagagctggttgcggcgtatcttcgctcctcgcgagggctgggctgtactgct
gagcaaattgtgatcaccagtggcgcgcagcacgcaatcagcctttgtgcacagctgctg
gtgacgccaggcgagggcgttgcagtggaaaatccgggctatcgcgcggcaggtcacgcg
ttcgcactggctggtgcgcggttgcagggtgtagcggtggacagcgagggtatgcgttgc
gccgaccttgagcagacggactgtcggctggcgtacgttacgccttcgcatcaataccct
acaggcgtggtcatgagcctggcccggcgtctggagttgctggcctgggccgagaaaaac
cagagctggatcgtcgaggacgattacgacggcgagtaccgctacagcgggtcgcccttg
gcacccttggctgcgctcgatcagaacgggcgagtgctttacgtcgggacgttcggcaag
attgttttcccggcgctgcgcctgggctatctggtgctgcccgagcatctggtgcgtccg
ttcagccagcgcaaggcggtggacatgcgccataccgagatcggcgtgcaggcggtcatg
gcgcaattcattgcccaagggcattttcagcgacacatccgccgcatgcgtcgtgcggcc
ctgagtcgtcgtgatgcgctgctggccggctggcctgacaacgttcccggctgcgcggca
atgcccaaagtcgtggcgggcctgcacgtaatggtcaaggtcgacagcgttgcgcgcgag
caagcgttgattgccaaagccagaagcgttggcgtcgagatgagcccattgagtggatac
tggctgtccgattccgacgagcctgtggataaccgtgccggtctggtgcttgggttcgcc
gctgtgcctgagcccgccatcgcggatgcgttgaacaggctacgcatggtctggtcggag
tag
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