Pseudomonas syringae pv. tomato DC3000: PSPTO_5515
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Entry
PSPTO_5515 CDS
T00118
Name
(GenBank) transcriptional regulator, RpiR family
KO
K19337
RpiR family transcriptional regulator, carbohydrate utilization regulator
Organism
pst
Pseudomonas syringae pv. tomato DC3000
Brite
KEGG Orthology (KO) [BR:
pst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pst03000
]
PSPTO_5515
Transcription factors [BR:
pst03000
]
Prokaryotic type
Helix-turn-helix
Other families
PSPTO_5515
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Gene cluster
GFIT
Motif
Pfam:
HTH_6
SIS
SIS_2
Motif
Other DBs
NCBI-ProteinID:
AAO58934
UniProt:
Q87U02
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Position
complement(6280855..6281721)
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AA seq
288 aa
AA seq
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MNLLQHIAQSRHLLRKSELKVADHVLLDPAAVMHSSMADLAHSVGISEPTIVRFCRAIGC
TGFQDLKLKLAQSLAAGASFGQFAIHEDDSVADYSLKIFDTTLHTLMEVRENLDPHALQQ
AVTAMAGANRVEFYGFGASGAVAADAQHKFFRLLLTAAAYSDPHMQAMSAVTLKPTDVAV
CISQSGRSKDLLITANLVRESGATLITLCPSQTPLAELSSVNLAIDVHEDTEIYTPLTSR
IAHLVVIDVLAMGVAMARGPSLVNHLKSVKRSLRGLRLSPKSIKSHED
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
ttgaatctgctgcaacacatcgctcagtcacgtcacctgctgcgcaaatcggagctcaaa
gtagccgaccatgtgctgcttgaccctgcggctgtgatgcacagttccatggccgatctg
gcgcacagcgtcggcatcagcgagccgaccatcgtgcgtttctgtcgcgccattggttgc
accgggtttcaggacctcaagctcaagctggcgcaaagtctggcggcgggcgccagtttt
gggcagttcgcgattcacgaagatgattcggtcgctgattacagcctgaagattttcgac
acaaccctgcacacgcttatggaagtgcgcgagaaccttgatccccacgccttgcagcag
gcggtcacggcgatggccggggccaatcgggtggagttttatgggtttggtgcatctggc
gccgtggctgccgatgcgcaacacaagttctttcgactgttgctgaccgccgctgcgtat
tccgacccgcacatgcaggccatgtcggcagttacgctcaagccgaccgatgtagcagtg
tgcatttcccagtcggggcgctccaaggacttgttgatcaccgccaatctggtccgcgaa
agcggcgctacgctgatcacgctgtgcccgagccagacgccgctggccgagctgtcttcg
gtcaacctggccatcgatgtgcacgaagacaccgaaatctatacaccgctgacctcgcgt
atcgcacatctggtggttatcgatgtgctggcaatgggcgtcgcgatggctcgagggccg
agcctggtcaatcacctcaagagcgtcaagcgcagcttgcgcggcttgcgtttgtcgccg
aagtcgatcaagagccacgaagactga
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