Pseudomonas syringae pv. tomato DC3000: PSPTO_5560
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Entry
PSPTO_5560 CDS
T00118
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
pst
Pseudomonas syringae pv. tomato DC3000
Brite
KEGG Orthology (KO) [BR:
pst00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pst02000
]
PSPTO_5560
Transporters [BR:
pst02000
]
Other transporters
Pores ion channels [TC:
1
]
PSPTO_5560
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
AAO58979
UniProt:
Q87TW0
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Position
6334735..6336954
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AA seq
739 aa
AA seq
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MPTYKCYVITNLGYQTHSSQVILHSMISPLFQSRRLVTTLCLLASSAGYVNASEQVELAP
STIRAAAQPQAEEHLDSVTNAGSRLPLTALQTPASTSSLDGYEVRRRGDANVQQAVARSP
GITAIGTPGDGGTALSARGFTGQGSVMQLYDGSRMYSAMGTVTLPVDTWAIERMDVLRGP
ASVLYGEGATGAVVNVIPKKPFEGEIENHLRLGYGSYDSQQTALDSGGSLTDQLSYRLNL
NQLRSNGWIGDGDSQSTFFSGALRWQANEDLSFALAHDGGNQRPMNYFGVPLINGRYHEV
LRDKNYNIENDKQHYDDQWTRLTTDWQVSDNVTSSNELYYLTSHRRWQNAENYNWDAATQ
QLSRSGYFSIKHNQEQVGDRQTFTFKHSLGGLDSQSVLGMDVNRIRFKLTNNSPYNDVNP
AGDPIDIEHPVPGLFQSASPYSELFKSTTRQLSVFGENRTQLSDQLSVITGVRRDYADIE
RNNLRDDSRTEKDLIGNNWKIGLVYALTPDSSAYAQYSTSTDGVGSLVSLNPTQQQFDLA
TARQSEVGFKQALWDQRLEWTLAAYHIVKKKLLTTDAGNPDLTQQVGQQSADGLEASMKL
QLPQDWALTANAAIVRARYDQFDQGVSGVSVSRDGNTPVDVPRRTANLWLDKQLGSSVQI
GGGLRYVDSRYADIANSEKLPAYTVADASLSWKALRNTTLGLQARNLFDRQYAASQYNEG
QQWILGEPRSLFVTADLSF
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgccgacctataaatgttatgttataacaaatttaggttatcaaacgcattcctcccaa
gtgatcctccattccatgatcagccctcttttccaatcccgtcgtctagtcacaacgctc
tgcctgctggccagcagcgcgggttatgtaaacgcttccgaacaggtagagcttgctccg
tccacgataagagctgcagctcagccccaagcggaagaacatctcgattccgttaccaat
gccggttctcgcctgccattgacggcgttacagactccggcaagcaccagctcgcttgac
ggatacgaggtgcgtcgtcgcggtgacgcgaatgtccagcaggccgtggctcgtagcccc
ggcatcacagctatcggtacgccaggcgacggaggcactgcgttgtccgcgcgtggtttc
acaggccagggatcggtgatgcagctgtatgacggcagccgcatgtacagcgccatgggc
acggtcaccctgcccgtggatacctgggcaatcgagcgcatggacgtgttgcgcggcccg
gcctccgtgctttatggcgaaggtgctacgggagcggtagtcaatgtcatccccaagaag
ccttttgaaggcgagatcgaaaaccacctgcgccttggctacggttcgtacgatagccag
cagacagcgctcgacagcggcggctcgctaaccgatcagttgagctatcgcttgaacctc
aatcagctgcgcagcaacggctggatcggtgacggcgactcgcaaagcacgttcttcagc
ggtgcgctgcgctggcaggccaacgaagacctgtcgttcgccctcgcccacgacggcggc
aaccagcgaccgatgaactacttcggcgtgccgctgatcaacggccgctaccacgaggtc
ctgcgcgacaagaactacaacatcgagaacgacaaacaacattacgacgatcaatggaca
cggctgaccaccgactggcaggtgtccgataatgtgacctcatccaacgagctttactac
ctgacctcgcaccgtcgctggcagaacgccgaaaactacaactgggacgctgctactcaa
cagctatcgcgcagcggctatttcagcatcaagcacaaccaggaacaggtgggcgatcgc
cagacgttcaccttcaaacacagtctgggcgggctggacagccagagtgtgctgggaatg
gacgtcaaccgcattcgcttcaagctgaccaacaattcgccctacaacgatgtgaatccg
gcgggcgacccgatagatatagagcacccggtgccggggctttttcagagtgcgtcacct
tattccgagctgttcaaaagcacgacccggcagctgtcggtattcggggaaaaccgcacg
caactgagcgatcaactctcggtgatcacaggcgtgcggcgtgactatgcggatatcgaa
cgcaataacctgcgtgatgacagccgcactgaaaaggacctgatcggcaacaactggaaa
atcggactggtttacgctctgacgccggacagttccgcctacgctcaatattcgaccagc
accgatggggttggcagccttgtctcgctcaaccccacgcagcaacaattcgacctcgcc
accgccaggcaatcggaggtgggcttcaaacaggccctgtgggatcagcgcctggagtgg
acgctggcggcttaccatatcgtcaagaaaaagctgctcaccaccgacgccggtaaccct
gacctcacccaacaggtcgggcagcagtctgccgacgggctggaggccagcatgaagctg
caattgccgcaggactgggctctgacagccaatgcggccatcgtgcgcgcccgctatgac
caatttgatcagggcgtatcgggcgtgtctgtctcgcgtgacggcaatacaccggtcgat
gtgccaaggcgcacggccaacctgtggctcgacaaacagctcggcagttcggtgcagatc
ggcggtgggctgcgctatgtcgacagccgatacgccgacatcgccaacagcgaaaaactg
cccgcctacactgtggccgatgccagcctgtcatggaaagcactgcgcaacaccacccta
ggcctgcaggcgcgcaacctgtttgaccgtcagtacgcagcgagtcagtacaacgaaggt
cagcaatggattctgggcgaaccccgctcgttgttcgtcacagcggacctgagtttctga
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