Providencia stuartii BE2467: BGK56_02490
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Entry
BGK56_02490 CDS
T04734
Name
(GenBank) ATP-dependent RNA helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
psta
Providencia stuartii BE2467
Brite
KEGG Orthology (KO) [BR:
psta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psta03019
]
BGK56_02490
Enzymes [BR:
psta01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
BGK56_02490
Messenger RNA biogenesis [BR:
psta03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
BGK56_02490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
DEAD
HA2_C
AAA_19
AAA_22
nSTAND3
HA2_N
ResIII
NACHT
ABC_tran
PhoH
AAA_11
T2SSE
NTPase_1
AAA_30
AAA_25
Lsm_interact
Zeta_toxin
SLFN-g3_helicase
TsaE
RsgA_GTPase
AAA_23
Motif
Other DBs
NCBI-ProteinID:
APG49875
LinkDB
All DBs
Position
533029..536931
Genome browser
AA seq
1300 aa
AA seq
DB search
MESMLTALEADIGQTSLRDQRLLKKRLQGIVKIRDEKSRVAVLNAIKADVETAKQKISNK
LLNPPKIVYPENLPVSQKKQAIYDAIKQHQVVIIAGETGSGKTTQIPKICLELGRGVKGL
IGHTQPRRLAARAVATRLAQELESEVGTIVGYKVRFSDQVSDSTQVKLMTDGILLAELQN
DRLLLQYDTIIIDEAHERSLNIDFILGYLRQLLPKRPDLKVIITSATIDPERFSRHFNQA
PIIEVSGRTYPVEVRYRPIMGDDNDSDRDQIDGIIDAVNELGQESSGDILIFMSGEREIR
DTADALSKLQLRHTEILPLFARLSNSEQNRIFHPHGGRRIILATNVAETSLTVPGIKYVI
DTGYARISRYSVRTKVQRLPVEPISQASANQRKGRCGRVSDGICIRLYSEEDFLSRPEFT
DPEILRTNLASVILQMTSIGLGDISAFPFVEAPDKRNIQDGVKLLEELGAIQAHQQSERG
YILTDIGRQLAQLPVDPRLARMVIEARKLGAVRETMVIVAALSIQDPRERPLDKQQAADE
KHRRFHDKQSDFLAFLNLWDYLKEQQTALSNAQFRKMCRQDFLNYLRIREWQDLYTQLRQ
VVKEQGFPINSAAADYRCIHTSLLAGLLSHIGQKDVEKPEFTGARNARFTIFPGSGLFKK
PPKWAMVAELVETSKLWGRVAATIEPEWIEPLAEHLVKHHYSEPHWSKSQGAVMASEKVT
LYGLPIVAARQVNYGKIDPLLCRELFIRHALVEGDWVTRHAFFRENRKLLAEVEDLEHKS
RRRDILVDDETLFAFYDQRIPNDVISTRHFDKWWKVASKQQPDLLNFEKNMLIKEDAAHV
SLLDYPNFWHQGELKFRLSYQFEPGTEADGVTVHIPLAILNQVHNVGFEWQVPGLRQELI
IALIKSLPKPVRRNFVPAPNYAAAFLERVPTPDGSLLDKLERELRRMTGVTVERDAWQLD
QLPSHLKMTFRVVGEKNKTIAEGQDLDELKNRLKEKVQETLSEVVDDGIEQSGLHIWSFG
ELPQRYEQKRGGYSVKAYPALVDERNSVGIRVFETEFEQQQAMWGGVRRLLLLNIPSPIK
YLHEKLPNKSKLGLYFNPYGKVLELIDDCIACGVDQLIATYGGPVWTEDGFGKLQEFVRA
ELNDVVVQIAKQVEQILTAVFAINKRLKGRVDFAMAMALSDIKGQMSNLVFKGFVTEHGW
KRLPDVLRYLNGIERRLEKLAIDPNRDRAQMSKVEHVTQMWQQWKAKLIPVQQQLPEVQE
IRWMIEELRISLFAQQLGTPYPISDKRIIQSMENLSQSLV
NT seq
3903 nt
NT seq
+upstream
nt +downstream
nt
gtggaatccatgctgacagccttagaagctgatattggacaaacttcattacgtgaccaa
cggttactgaaaaagcgtcttcaaggaatagttaaaattcgtgatgaaaaatcacgagtt
gcggtactgaatgcgataaaagcggatgttgaaacagcgaaacaaaaaatttcgaacaag
ctgcttaatccacctaaaatcgtctatccagaaaatcttcctgttagtcagaaaaaacaa
gctatttatgatgcgataaaacagcatcaagtggtgatcatcgcgggtgaaacagggtcc
ggtaaaacgactcagatccccaaaatatgtctggaattagggcgaggcgttaaagggcta
atcggtcatacacaaccaaggcgactagccgctcgtgcggtagcaacccgtctagctcaa
gagcttgaaagcgaagtcggaactattgttggttataaagttcgctttagtgatcaagtg
agtgatagtacacaagtcaaattaatgacagatggcattttgttagcagaactgcaaaat
gataggttactgctgcaatatgatacgatcattatcgatgaggctcacgaacgtagccta
aatatcgattttatcttaggttacctgcgccaattattacctaaacgtcctgatctaaaa
gtcattattacgtcagcaactatcgatcctgaacgtttctctcgccattttaatcaggca
cccattattgaagtgtcggggagaacttatcccgttgaagtgcgttatcgcccgattatg
ggggatgataatgacagcgaccgcgatcaaatcgatggcatcattgatgctgtaaatgag
cttgggcaggaaagctcaggggatattttgatctttatgagcggtgaacgagaaatccgc
gataccgctgatgccttgtcaaaattacaattgcgccataccgaaattttaccgctattt
gctaggctatcgaatagtgaacaaaatcgcatattccacccacatggtgggcggcgaatt
attttagctactaacgttgctgaaacgtctttgaccgtgcctggcatcaaatatgttatt
gatactggttatgcgcgaataagccgttacagtgttagaaccaaggtgcagcgcttacct
gttgaaccgatctcccaagcttcagcaaatcagcgtaaaggtcgctgtggtcgtgtttct
gatggtatttgtattcgtttatattctgaagaggactttttaagtcgcccagagtttacc
gatcctgaaatactaagaaccaatttggcgtctgttattttacaaatgacctcaattggc
ttaggagatattagcgcatttccatttgtcgaagctccggataaacgtaatattcaagat
ggcgtgaagttattagaagagcttggggctattcaggcgcatcaacagagtgaacgcggt
tatatattgacggatattggtcgtcaattggcgcaactaccggttgacccacgtctcgct
cgaatggtgatagaagcgagaaagctaggggcagtcagggaaaccatggtgattgtggcg
gcattatcgattcaagacccaagggagcgcccattagataaacaacaagcggcagatgaa
aagcatcgccgcttccacgataaacaatctgatttcttagcattccttaatctgtgggat
tacttaaaagagcagcaaaccgctttatcaaatgcgcaatttagaaaaatgtgccgccaa
gattttttgaactatttacgcattcgagagtggcaagatctctatactcaattgaggcaa
gttgttaaagagcaaggttttccaattaatagtgcagcggcagattaccggtgtattcat
acatcattacttgctgggctgctatctcatatcggtcaaaaagatgtagaaaaaccagaa
tttacaggcgctaggaatgcaagattcactatcttccccggctcaggtttatttaaaaag
cccccaaaatgggcaatggtcgccgagttagtagaaacgtcaaaattatgggggcgggtg
gctgcaactattgagcctgaatggatagagccgttagcggagcaccttgttaagcatcat
tacagcgaacctcattggtctaaatcgcaaggtgctgtgatggcctctgaaaaggtcact
ttgtatggattaccgatcgtcgccgcgcgccaagtgaattacgggaaaatcgacccctta
ttgtgtcgcgaactcttcattcgtcatgcactggtcgaaggggattgggttactcgtcac
gcatttttcagggaaaatcgtaagctattggcggaagttgaagatttagaacacaagtct
cgtcgtcgtgatattttggttgatgatgaaaccttgtttgcgttttatgaccagcgtatt
cctaatgatgtgatctctactcgccattttgataagtggtggaaggttgcttcaaaacag
cagcccgatctcctgaactttgaaaaaaatatgttgatcaaagaggatgcggcgcacgtt
tcattgctagattatccaaacttttggcatcaaggtgagctgaaattccgcttaagttat
caatttgagccaggaacggaggcagatggggtgacagtgcatatcccattagccatttta
aaccaagtacacaatgttggttttgagtggcaagttccggggttacgtcaagaactgatt
attgcgttgattaaatcattacctaagcctgtacgtcggaattttgtgcctgcacctaat
tatgccgcggcatttcttgaaagagtaccgacaccagatggtagcctacttgataagctt
gagcgtgaattacgtcgcatgacaggggtgactgttgaacgtgatgcttggcaattagac
caactacctagccatttgaaaatgacattccgcgtagtgggtgaaaaaaataaaaccatc
gctgaaggtcaagatctggatgaattgaaaaatcggctcaaagaaaaggtacaagaaacc
ctttccgaagtggttgatgatggcattgaacaaagcggcttacatatctggagctttggt
gagttacctcaacgttacgaacagaaacgaggagggtattctgttaaggcttatccggcc
ttagtggatgaaagaaacagtgttgggatccgcgttttcgaaaccgaatttgaacaacaa
caagcgatgtggggtggtgtacgtaggttactgttactgaatattccatcgccaattaaa
tacttacatgaaaaactcccgaacaaatctaaactgggattatattttaatccgtatgga
aaagttttagagttaatcgatgattgtatcgcctgtggtgttgatcaactcattgcgact
tatggtggccctgtgtggacggaagatgggtttggcaagttacaagagtttgtgcgggct
gaactcaatgatgtagttgtacaaatcgcgaaacaagttgagcaaatactcactgcggta
tttgcaatcaataaacgcttaaaaggacgcgttgactttgcgatggcaatggcactttcg
gatataaaagggcagatgtctaacttagtctttaaaggctttgtcactgaacatggttgg
aaacggcttcctgacgtgctccgttatttgaatggtattgagcgccgattagaaaaactg
gcgattgatcctaatagagaccgtgcccaaatgagtaaagtggagcatgtgacacaaatg
tggcagcaatggaaggcgaaactgataccagtacaacaacaattaccggaagtacaagag
atccgttggatgatcgaagagttgcgtataagcctatttgcacagcagcttggtacgccg
tatccgatttcggataaacggattattcaatcaatggaaaatttaagtcagtcacttgta
taa
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