Providencia stuartii BE2467: BGK56_05045
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Entry
BGK56_05045 CDS
T04734
Name
(GenBank) ribonuclease E
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
psta
Providencia stuartii BE2467
Pathway
psta03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psta00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BGK56_05045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psta03019
]
BGK56_05045
03009 Ribosome biogenesis [BR:
psta03009
]
BGK56_05045
Enzymes [BR:
psta01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
BGK56_05045
Messenger RNA biogenesis [BR:
psta03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BGK56_05045
Ribosome biogenesis [BR:
psta03009
]
Prokaryotic type
rRNA processing factors
BGK56_05045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
PNPase_C
Motif
Other DBs
NCBI-ProteinID:
APG50352
LinkDB
All DBs
Position
1054928..1058179
Genome browser
AA seq
1083 aa
AA seq
DB search
MKRMLINATQQEELRVALVDGQRLYDLDIESPGHEQKKANIYKGKITRIEPSLEAAFVDY
GAERHGFLPIKEIAREYFPSNYHSQGRPNIKDVLKEGQEVIVQVDKEERGNKGAALTTFI
SLAGSYLVLMPNNPRAGGISRRIEGEDRTELKEALSSLEIPDGMGLIVRTAGVGKSAESL
QQDLLYRLRHWEAIKKAAENRPAPFLIHQESNVIVRAFRDYLRPDIGEILIDNPKVVEMA
RNHIEAIGRGDFASKIKYYSGDVPLFSHYQIESQIESAFQREVRLPSGGALVIDTTEALT
AIDINSSRSTRGGDIEETAFNTNLEAADEIARQLRLRDLGGLIVIDFIDMTPVRHQREVE
NRLREAVRQDRARIQIARISRFGLLEMSRQRLSPSLGESSHHVCPRCSGTGTIRDNESLS
LSVLRLIEEEALKENTHEVHAIVPVQIASYLLNEKRKAVSEIETRQRNVRVVIVPNDQMQ
TPHFHVIRIRKGEEVNTLSYNLAHYHETETLNSTEDPAAERKAPEQPAISAFALQEPVEQ
PVTVKSKENKARTETPKQGVKVDAQPSFFSKVAEFFKKLFAGEEEKVAEKPAEKSRQNSG
NDKRRNNERRNNRRNNRRDRDENSDNRENRDNRSNRNAQSDEANNRKGRNNKNANQQDEQ
NVDSNSREAQQQQRREQRAERRRRQDEKRQQQAAKAQQEAVQGADNTPVEKEEPQARPVT
PRRQRRQLTQKIRITDNVEAVAQEDEVVKVATAVENDAMPIAALPAPTHVDEQVAEVNSS
EQQDVQVANQEDKQDTIIPRRSRRSPRHLRVSGQRRRRYRDERHLTKSPMPLFAAVASPE
LASGKVFISYPVVQPQQETIAIMTNEEMLEQQGIVSVEAVETTDITSSQVIEQANETVET
VAIEPVETVTETNVNLVAESADEHAVSLEPAIAPQAEPAVVHTEQALEDTQPEPVVETAP
TVEPKAPVAVIEDVVIEQPKVEPTAEIAEQDDQPQTSTDAVEEPKAEAVEVPYVAKSTVI
VASKAARHAYSPMTKAPAPEVVESTFEIKVYQREASTFVSKGAGGHVATNYATSQMAKPA
HFE
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaatgctaataaacgcgactcaacaggaagagttgcgtgttgcccttgttgac
gggcaacgactctatgatctggatatcgaaagtccaggtcatgaacaaaaaaaagcgaat
atttacaaaggaaaaataactcgcatcgaaccaagtcttgaagctgcttttgttgattat
ggtgctgaaagacacggtttcctccctatcaaagagatcgctcgcgaatacttcccaagc
aattaccactctcaaggccgccccaatatcaaagatgtccttaaggaaggccaagaagtt
atcgttcaggttgataaagaagagcgtggcaataaaggtgccgcactcaccacgtttatc
agcttagcgggaagttatttagtactgatgccaaataacccgcgtgcgggtggtatttct
cgccgtattgaaggtgaagatcgtacagaattaaaagaagcgctctcctcccttgagatc
ccggatgggatggggttgattgttcgcaccgcgggcgtgggtaaatccgcagaatcttta
caacaagatttgctctaccgcttacgccactgggaagctatcaaaaaagcggctgaaaac
cgccctgctccgttcttaatacaccaagaaagtaacgtcattgttcgtgcgttccgtgac
tatttacgcccagatatcggcgaaatccttatcgataacccgaaagtggtcgaaatggca
cgtaaccatattgaagcgattggccgtggtgattttgccagcaaaatcaaatattatagc
ggtgatgttccgctatttagccattatcaaatcgaatcacaaattgaatctgccttccaa
cgtgaagtacgccttccatctggtggtgcattagtgattgataccaccgaggcgttaacg
gctatcgatatcaactcttcacgctcaacacgcggcggagacattgaagagaccgcattt
aatacaaaccttgaagcggccgatgagatcgcacgtcaattacgtctgcgtgaccttggt
ggcttaattgttatcgactttatcgatatgacgccagtcaggcatcaacgtgaagttgaa
aaccgcctacgtgaggccgtgcgtcaagaccgtgcacgtattcaaatcgcccgtatctcg
cgtttcggtttattagagatgtcgcgccagcgtttaagcccatcattaggtgaatctagc
caccatgtgtgccctcgttgttcgggtacaggaaccatccgtgataatgaatcattgtct
ctttctgttttgcgtcttattgaagaagaagcattaaaagagaatacacatgaagttcat
gctatcgttccggtacaaattgcttcctatctacttaacgaaaagcgtaaagcagtcagc
gaaatcgaaacgcgtcaacgcaatgttcgcgtggtcattgtgccaaacgaccaaatgcaa
acgcctcattttcacgtgatccgtattcgtaaaggtgaagaagtaaatacgctgagctat
aacttagctcactaccatgaaacggaaaccttaaacagtacggaagatccagcggctgaa
cgtaaagcccctgagcaaccagctatctctgctttcgcgttacaagagcctgtagaacag
cctgttactgttaagtctaaagagaacaaagcgcgcactgaaacaccaaaacaaggggtt
aaagtggatgcccagccgagcttttttagcaaggtagctgaattcttcaaaaaactcttt
gctggtgaagaagaaaaagttgctgaaaaacctgctgagaaaagtcgccaaaatagcggt
aacgacaagcgccgtaacaatgaacgccgcaataatcgtcgtaataatcgccgtgatcgt
gatgaaaacagtgacaaccgcgaaaatcgcgataatcgttctaaccgtaatgcgcaatct
gacgaagctaacaatcgtaaaggccgcaataataagaacgctaatcagcaagatgagcaa
aacgttgatagcaatagccgtgaagcgcagcaacagcagcgccgcgaacaacgtgctgaa
cgccgtcgccgtcaagatgaaaaacgtcaacaacaagcagctaaggcacaacaagaggca
gttcaaggtgctgataatacacctgtagagaaagaagagcctcaagcgcgccctgttacg
cctcgtcgtcaacgtcgtcaattgacacaaaaaattcgtatcactgataacgttgaagcc
gtagcgcaagaagatgaagtggttaaagttgcaactgccgttgaaaatgatgctatgcct
atcgcagcactccctgctccgactcatgttgatgagcaagtggctgaggtaaatagctca
gaacaacaagatgttcaagttgctaaccaagaagataagcaagataccatcattccacgt
cgctcacgtcgttcaccacgtcacctacgtgtcagtggtcagcgtcgtcgtcgttaccgt
gatgagcgtcatctgacaaaatcaccaatgcctctgttcgctgccgtagcctcacctgag
ttagcatcaggtaaggtgtttatcagctatcctgttgttcaaccacaacaagaaaccatc
gctatcatgaccaatgaagagatgcttgagcaacaaggtattgttagtgtagaggccgtt
gaaaccaccgatatcacatcttctcaagtcatcgagcaggctaatgaaacggttgaaact
gtcgctatcgaaccagtagaaaccgtcactgaaaccaacgttaatcttgtggctgaatcc
gcagatgagcatgcagtttctcttgaacctgccattgccccacaagctgaaccggctgtc
gttcatacagagcaagctctagaagacactcaaccagagcctgttgttgaaacggcacca
accgttgaacctaaagcaccggtcgcggtcattgaagacgttgtaattgagcaacctaaa
gtggagcctacagcagagatagccgaacaagatgatcagccgcaaaccagcacagatgca
gttgaagagcctaaggctgaagctgttgaagtgccttatgtagcgaaatcaacggttatt
gttgcaagtaaggcagcacgtcatgcttactcaccaatgaccaaagcaccagcgcctgaa
gtggtcgaatcaacattcgaaatcaaggtttaccagcgtgaagcctcaacctttgtcagt
aaaggtgccggtgggcatgtagcaaccaattatgcgacatcacaaatggcaaaaccggct
cattttgaatag
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