Providencia stuartii BE2467: BGK56_15160
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Entry
BGK56_15160 CDS
T04734
Name
(GenBank) DEAD/DEAH family ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
psta
Providencia stuartii BE2467
Pathway
psta03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psta00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BGK56_15160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psta03019
]
BGK56_15160
03009 Ribosome biogenesis [BR:
psta03009
]
BGK56_15160
Enzymes [BR:
psta01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BGK56_15160
Messenger RNA biogenesis [BR:
psta03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BGK56_15160
Ribosome biogenesis [BR:
psta03009
]
Prokaryotic type
rRNA helicases
BGK56_15160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Cas3-like_C_2
DRTGG
AAA_22
Motif
Other DBs
NCBI-ProteinID:
APG52207
LinkDB
All DBs
Position
3335714..3337576
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AA seq
620 aa
AA seq
DB search
MTTETDISFADLGLSASILTALNDLGYEKPSPIQKQCIPLLMDGNDVLGMAQTGSGKTAA
FSLPLLHNIDPDLKAPQILVLAPTRELAVQVAEAMGDFSKHMSRVNVVALYGGQRYDVQL
RALRQGPQVVVGTPGRLLDHLKRGTLDLSKLKGLVLDEADEMLRMGFIEDVENIMSQIPA
EHQTALFSATMPEPIRRITRRFMKEPKEIRIQASITTRPDIAQSYWTVYGMRKNEALVRF
LEAEDFDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDIL
IATDVAARGLDVDRISLVVNYDIPMDAESYVHRIGRTGRAGRAGRALLFVENRERRLLRN
VERTMKLTIPEVELPDSQLLSERRQAKFAEKIQQQFESSDLDQYRALLKKLSPSEDVDME
TLAAALLKMAQGERALILPPDAPRRPRREFNDRDDRRRDRNGFDRAERGDRSGRRERRDV
GDMEMYRIEVGRDDGVEVRHIVGAIANEADISSRYIGNIKLFGSHSTIELPKGMPTEVLT
HLSRARILNKPMQMQLIGDAQPFERRERRGGSRRDGGFNGERRNDREGGNRRGGHRGNGR
GRNEDHNSAAPRRRSTSHNA
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccgagactgatatctctttcgctgatttaggtttatcagcgtctattttgact
gcactaaacgacctgggatatgaaaaaccttctccgatccaaaaacaatgtattccattg
ttaatggacggtaatgatgtgttgggtatggcacagacggggagtggtaaaaccgcagcc
tttagtttgccgctactgcacaacattgatccagatttaaaagctccgcaaattctagtc
ctagccccaacacgtgagttggcggttcaggttgctgaagcgatgggcgatttttctaaa
cacatgagccgtgttaacgtggtggccctatatggtggccagcgttacgacgtgcaattg
cgtgctttgcgccaagggccacaagttgttgtaggaacgcctgggcgtctgcttgatcat
ctgaaacgcggtacattagacctgtctaaattgaaaggcttagtactggatgaagctgat
gaaatgctgcgtatgggctttattgaagatgttgaaaacatcatgagccaaatcccagca
gagcatcaaacagcgctgttttcagcgacgatgccagaaccaattcgtcgtataacacgc
cgtttcatgaaagagcctaaagaaattcgtattcaggctagcattacaacacgtccagat
attgctcaaagctattggactgtttacggcatgcgcaaaaatgaggctctggttcgtttc
ttagaagccgaagattttgacgcagcaattatttttgttcgtacaaagaatgcaacgctg
gaagtggcagaagcgcttgagcgcaacggttataacagtgctgcattgaacggtgatatg
aaccaagcgttacgtgaacaaacgctagaacgtttaaaagacggtcgtttggatattttg
atcgccactgacgttgctgctcgtggtcttgatgttgaccgtattagcttagtcgttaac
tatgacatcccaatggatgcagagtcttacgttcaccgtatcggtcgtactggccgtgca
gggcgtgctggccgtgcactcttgttcgtagagaaccgtgagcgtcgtttgctgcgtaac
gttgaacgcaccatgaagctaacgatccctgaagttgaactgccagattcacaattgcta
agtgaacgtcgtcaggcgaaatttgctgaaaaaatccaacagcaatttgaaagcagtgac
ttagaccaataccgcgcgctgttaaagaaactgtcaccgtcagaagatgttgatatggaa
acattggccgccgcgttgctaaaaatggctcaaggtgagcgtgcacttattctgccacca
gatgcaccgcgtcgcccacgtcgtgaattcaatgaccgtgatgatcgccgtcgtgatcgt
aatggctttgaccgtgcagagcgtggtgatcgtagtggtcgtcgtgagcgccgtgatgtt
ggcgatatggaaatgtatcgcatcgaagtaggccgtgatgatggcgtagaagtgcgccac
attgtaggggcgattgccaatgaagcggatattagcagccgttatattggtaatatcaag
ctgtttggctctcactcaacgattgagctaccaaaaggcatgccaaccgaagtgttaact
cacttaagccgtgcacgcattttgaataaaccaatgcaaatgcaattaattggtgatgca
cagccgtttgaacgtcgtgagcgtcgtggtggttcacgccgtgacggtggctttaatggt
gagcgtcgcaacgaccgtgagggtggcaatcgtcgtggtggccatcgtggtaacggacgt
ggtcgtaatgaagatcacaactcggcagctccgcgccgccgtagcaccagccataatgct
taa
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