Paenibacillus stellifer: PSTEL_07295
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Entry
PSTEL_07295 CDS
T03335
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pste
Paenibacillus stellifer
Pathway
pste03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pste00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PSTEL_07295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pste03019
]
PSTEL_07295
03400 DNA repair and recombination proteins [BR:
pste03400
]
PSTEL_07295
Enzymes [BR:
pste01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PSTEL_07295
Messenger RNA biogenesis [BR:
pste03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PSTEL_07295
DNA repair and recombination proteins [BR:
pste03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PSTEL_07295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
Helicase_C
DEAD
HRDC
RecQ_Zn_bind
Helicase_Sgs1
Cas3-like_C_2
HHH
ResIII
Motif
Other DBs
NCBI-ProteinID:
AIQ62938
UniProt:
A0A089LUR1
LinkDB
All DBs
Position
1526025..1527869
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AA seq
614 aa
AA seq
DB search
MNTQELTMEQAQQVLHKYYGYPDFREGQKRIVASLLEGRDTLGIMPTGGGKSICYQVPAM
LLPGMTLVVSPLISLMKDQVDALTTAGIPAAYINSTLTGKEVNDRIRAARRGELKLLYVA
PERLELDWFRLEMAELPLACVAVDEAHCVSQWGHDFRTSYLAVSPFVEELPNRPILAAFT
ATATPEVMEDMTRLLRLRDPGVFVTGLGRDNLAMSVLRGENKKDFVLQYAAAHGHEPGIV
YAATRKEVDDLYQRLRSAGFAAGRYHAGMSDEERAESQEAFLYDDIRVMVATNAFGMGID
KSNVRFVIHYNMPKNMEAYVQEAGRAGRDGEPSECILLFSAQDIMTQKFLIEQNPQDSER
KANDYRKLQQMIDYCYTTRCLRSAMLDYFGEAHEDKPCGICSSCTDDRELIDITVDAQKI
FSCIHRMRERFGIALVASVLKGSRSQKVLQYGFDKLPTHGAMSGRTEKEITEIVNVLISE
GYLALSEGQYPVVRLQQPAAEVLRGQREVLQRAARASRTGGSSRDRSRARDYSPSAVNET
VFEQLRLIRRELAGREHVPSYIIFNDATLREMSIAAPQTEDEMMSVKGVGEVKYRKYGKA
FLEFFQSDSYSNEG
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgaatacgcaggaacttacgatggaacaagcgcagcaggtgctgcataaatattacggc
tacccggatttccgggaaggccagaagcggattgtcgcgagtcttctggaagggcgggat
acacttggcatcatgccgaccggcggcgggaagtcgatctgctatcaggttccggcgatg
ctgctgccgggcatgacgctcgttgtctcgccgctcatctccctgatgaaggaccaggtc
gacgctctcacaacggcgggcattcccgccgcctacatcaacagcacgctgaccggcaag
gaggttaacgaccgcatccgcgccgcccggcgcggcgagctgaagctgctctacgtcgct
cccgagcggctggagctggactggttccgcctggaaatggcggagctgccgcttgcctgc
gtcgcggtggacgaggcccactgcgtctcgcagtggggccatgacttccgcaccagctat
ctggcggtgtcgccgttcgtggaggagctgccgaaccggccgattctcgcagccttcacg
gcgaccgcgacacccgaggtcatggaagacatgacccggctgctccgtctgcgcgacccc
ggcgtgttcgtcacgggtcttggccgggacaatctggcgatgtccgtgctgcgcggggag
aacaagaaggacttcgtccttcaatatgcagcggcgcatggtcatgagccgggcatcgtg
tacgcagccacccgcaaagaggtggatgatctgtaccagcgcctccgcagcgccggattt
gcggcgggccgctaccatgccggaatgagcgacgaggagcgggcggagagccaggaggcg
ttcctgtacgacgacatccgcgtaatggtcgccaccaacgccttcggcatggggatcgac
aagtcgaacgtccggttcgtcattcactacaacatgccgaagaatatggaggcctacgtc
caggaagcgggtcgtgcgggccgcgacggcgagccgagcgaatgcattctgctcttcagt
gcgcaggacatcatgacccagaaattcctgatcgagcagaacccgcaggattcggagcgg
aaggcgaacgattaccgcaagctccagcagatgatcgactactgctacacgacgcgctgc
ctgcgcagtgcgatgctcgattatttcggcgaggcccatgaagacaagccctgcggcatt
tgcagctcctgcacggacgaccgggagctgatcgacatcacggtcgatgcgcagaagatt
ttctcctgcatccaccggatgagagagcggttcggcatcgcgctggtggcgtccgtgctg
aagggctcgcgcagccagaaggtgctgcagtacggcttcgacaagctgccgacccatggc
gccatgtccggccgcacggagaaggagattacggaaatcgtcaacgtgctgatctccgag
ggctatctggccctgtccgagggccagtatccggtagtgcggctgcagcagcccgccgcc
gaggtgctgcgcggccagcgcgaggtgctgcaacgggcggcccgggcttccaggaccggc
ggctcatcccgtgaccgcagccgtgcccgcgactactcgccgtcggccgtcaacgagacg
gtgttcgagcagctgcgccttatccgccgcgagctggcggggcgggagcatgtgccgtct
tacattattttcaacgatgcgacgcttcgagagatgagtatcgccgcaccacaaaccgag
gatgaaatgatgtcggtgaagggtgtcggtgaggtcaaataccggaaatacggcaaggcg
tttctggagttttttcaaagcgattcctattccaatgaagggtaa
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