Paenibacillus stellifer: PSTEL_10135
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Entry
PSTEL_10135 CDS
T03335
Name
(GenBank) 5-hydroxymethyluracil DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
pste
Paenibacillus stellifer
Pathway
pste03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pste00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PSTEL_10135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pste03400
]
PSTEL_10135
Enzymes [BR:
pste01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
PSTEL_10135
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
PSTEL_10135
DNA repair and recombination proteins [BR:
pste03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PSTEL_10135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Ribosomal_S13
DZR
PAS_PdeA
HscB_4_cys
RNHCP
Motif
Other DBs
NCBI-ProteinID:
AIQ63394
UniProt:
A0A089N3Y6
LinkDB
All DBs
Position
2157928..2158764
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AA seq
278 aa
AA seq
DB search
MPELPEVETVKRTLNTLIHGKRIQKVTVRLPRIIRRPDDITIFAHMLEGHTIQTVERRGK
FLRFLLDGLVLVSHLRMEGRYGLYAEGDPLDKHSHVIFHFDDGTELRYTDVRQFGTMDLF
LPGEDLLQQPLKNLGLEPLSPDFTAEAFKALLAGKNTKIKPLLLNQAYVVGIGNIYVDES
LHAAGIHPERAAGSLTDEQIVRLHDSIVDTLTNAVNAGGSSVKSYVNGQGESGSYQHKLR
IYGRKDEPCYTCGSKVEKSVVGGRGTHFCPSCQPPLLT
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgccggaacttccggaggtagagaccgttaagcgaacattgaacaccttgattcacggt
aaaagaatacaaaaagtcaccgtccggctgccccggattatccggcggccggacgatatc
acgatatttgcgcatatgctggaaggccatacaatccagacggtggagcggcgcggcaaa
tttctgcgttttctgctggatggactcgtgctggtcagccatctgcggatggaggggcgg
tacggcctgtatgccgagggcgatcctctggacaagcacagtcatgtgattttccacttc
gatgacggcactgagctccggtacaccgatgtccggcagttcgggacaatggatctgttc
cttcccggcgaggatcttcttcagcagccgctgaaaaatctggggctggagccgctgtct
cctgattttacggcggaggcgtttaaggctctgcttgccgggaagaatacaaaaatcaaa
ccgctgctgctcaatcaggcatacgtggtcggcatcggcaatatttatgtggatgagtcc
ctgcatgctgcaggcattcatccggagagagctgccggttccttgaccgatgagcagatc
gtccggcttcacgactccattgtcgatacgctgacgaacgcggtgaacgccggcggctct
tccgttaagtcctacgtgaacggccagggagagagcggaagctatcagcataagcttcgg
atatacgggcgtaaggatgaaccttgttacacttgcggctccaaggtggagaagagcgtt
gtcgggggacggggcacgcatttttgcccaagctgccagcctccgctgctgacctag
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