Paenibacillus stellifer: PSTEL_16495
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Entry
PSTEL_16495 CDS
T03335
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pste
Paenibacillus stellifer
Brite
KEGG Orthology (KO) [BR:
pste00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pste03032
]
PSTEL_16495
03400 DNA repair and recombination proteins [BR:
pste03400
]
PSTEL_16495
Enzymes [BR:
pste01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
PSTEL_16495
DNA replication proteins [BR:
pste03032
]
Prokaryotic type
DNA Topoisomerases
PSTEL_16495
DNA repair and recombination proteins [BR:
pste03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PSTEL_16495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Zn_ribbon_RPB9
Toprim_3
Auto_anti-p27
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
AIQ64462
UniProt:
A0A089LUA5
LinkDB
All DBs
Position
complement(3427024..3429123)
Genome browser
AA seq
699 aa
AA seq
DB search
MADSLVIVESPAKAKTIGKYLGSKYIVKASMGHVRDLPKSQIGVEVENGFNPKYITIRGK
GSVLKELKDASKKVKKVYLAADPDREGEAIAWHLAHALELDDTQDCRVVFNEITKQAVKD
AFKTPRKINMDLVNAQQARRILDRLVGYKISPLLWKKVKKGLSAGRVQSVAVKIIMDREN
EISAFVPEEYWTITAKLAIRDTLFDSKFYKLNGEKLELGKESDVQKVLQAIEGSDFIVSE
VKEKERQRHPSAPFTTSSLQQEAARKLGFRAAKTMSVAQQLYEGVELGKEGTVGLITYMR
TDSTRISTTAQDEARELITGKYGENFLPETPRQYSKKAAGTQDAHEAIRPTSALREPESV
KEFTSRDQFRLYKLIWERFVSSQMASAVLDTLSVDIKAGDAIFRAVGSKVSFPGFMKVYV
EGNDDGTTEEEKYLPQLQSGDKLSVKEIDPKQHFTQPPPRYTEARLVKTLEELGIGRPST
YAPTLETIQKRGYVAIEEKKFMPTELGELIIEQMEQFFPEILDVEFTAHMEGDLDHVEEG
VEDWVKVLGEFYESFEKRLEVAEEEMKEIEIVDEVSDEICEKCGKPMVYKLGRFGKFLAC
SGFPECRNTKPIIKDIGVECPKCHEGKVVERRSKKGRVFYGCDHYPECDFVSWDKPSAKP
CPECGSWMIEKRNKQGVKLQCTSCDHSEVLEENEEEAAE
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
gtggcggattcattggtcattgtcgagtcgccggccaaggcgaagacgattggcaaatat
ttaggcagcaaatatatcgtaaaagcatcgatgggacatgttcgcgacctgcccaagagc
cagatcggcgtggaagtcgaaaatggcttcaatcccaaatacattacaatccgcgggaaa
ggctctgtgttgaaagagcttaaggatgcgagcaaaaaagttaaaaaagtatatctggcg
gctgacccggaccgcgaaggagaagcgatcgcctggcatctggcgcatgctctcgaactg
gacgatacccaggattgtcgggttgtctttaacgaaatcaccaagcaggcagtgaaggac
gcattcaagactccccgcaaaatcaacatggaccttgtcaatgcccaacaggccagacgc
attctggaccggctcgtgggctacaagatcagtcctcttttatggaagaaagtcaaaaaa
ggcctctccgcaggtcgcgtgcaatccgttgccgttaagatcattatggaccgtgagaat
gaaatctcggccttcgtgcctgaggaatactggacgattacggctaagcttgccatccgg
gacaccttgttcgactcgaaattttataagctgaacggtgaaaagctggaacttggcaag
gagagcgacgtacagaaagtattacaagcgattgaaggctccgactttattgtctccgaa
gtgaaggagaaagaaagacagcgtcacccgtcggcgccgtttacgacaagctcacttcaa
caggaggcggcccgcaagctgggcttccgggcggccaagaccatgtccgtcgcgcagcag
ctgtacgagggtgtggagcttggcaaggaaggaaccgttggtctcatcacgtatatgcgt
acggactccacccggatctcgactacggcacaggatgaagcccgggagctgattacaggc
aagtacggcgagaacttcttgccggagactccacgccaatattcgaagaaagcggccggg
acccaggatgcgcatgaagcgattcgtccgacatcggccctgcgggaaccggaatccgtt
aaagagttcaccagccgcgaccaattcagactgtataagctgatctgggaacgttttgtc
tccagtcagatggcttctgccgtactcgatacgctgtcggtggatatcaaggcgggcgat
gccattttccgggcggtcggctccaaagtgtcgtttccaggcttcatgaaggtttatgtg
gaagggaacgacgacggaacgacggaggaagagaaatatttgccccagcttcaatcgggg
gataagctctctgttaaggaaatcgacccgaagcagcatttcacacagccgcctccgcga
tatacggaagcacggctcgtgaagacgctggaggaactgggaatcggtcgtcctagtacg
tacgctccgactctggagacaatccagaaacgcggctatgtcgcgatcgaagagaagaag
ttcatgccgacggagctcggagagctcattatcgagcagatggagcagttcttcccggaa
attctggatgtcgagtttacagcccatatggaaggtgatctcgaccacgtggaggaaggc
gtcgaagattgggttaaggtactgggcgaattctacgaatccttcgagaagcgtctggaa
gtcgccgaagaagaaatgaaagagatcgagattgtcgatgaggtctctgacgagatttgc
gagaaatgcggcaagccgatggtatataagctaggccgttttggcaagttcctggcctgc
tcgggctttccggagtgccggaacaccaagccgatcatcaaggatatcggtgtggaatgt
ccgaaatgccatgaaggcaaggttgtggagcgccggagcaagaagggccgcgtcttctac
ggatgcgaccattatcccgagtgcgatttcgtctcatgggataagccgtccgcgaaacct
tgtccggaatgcggctcctggatgatcgagaaacggaataagcagggcgtgaagcttcag
tgcacatcctgtgaccacagcgaagtgctggaagagaatgaggaagaagcggcggagtaa
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