Paenibacillus stellifer: PSTEL_20320
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Entry
PSTEL_20320 CDS
T03335
Name
(GenBank) single-stranded DNA exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
pste
Paenibacillus stellifer
Pathway
pste03410
Base excision repair
pste03430
Mismatch repair
pste03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pste00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PSTEL_20320
03430 Mismatch repair
PSTEL_20320
03440 Homologous recombination
PSTEL_20320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pste03400
]
PSTEL_20320
DNA repair and recombination proteins [BR:
pste03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
PSTEL_20320
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PSTEL_20320
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
PSTEL_20320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
ssDNA-exonuc_C
DHH
DHHA1
tRNA_anti-codon
DUF7185
Motif
Other DBs
NCBI-ProteinID:
AIQ65119
UniProt:
A0A089N8I6
LinkDB
All DBs
Position
complement(4237678..4240077)
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AA seq
799 aa
AA seq
DB search
MLHSKTKWQSPAADPALSGELARRLSISPLVASLLAARGMTEPGEALQFIRGGADEEHDP
FLLKGMKEAVPRIRRALEDGEHILVYGDYDADGVSSTSLMIHLLRRLGASFDIYIPHRSN
EGYGLHNHALDWALQQGVTLILTVDTGISACSQIAYANELGMDVIVTDHHEPPEVLPPAY
SLINPKLPDCPYPFKGLCGVGVAYKLAQALLGTDVPEEWTEIVAIGTIADLMPLLGENRA
LVRRGLASMRQTRYPGIRALLEVSAVPVERVGAINVAFALAPRINASGRLDHAGRAVSLL
TTEDADDAELLASELDMLNKERQMVVERIVTEAAAALEEKMNGGPVPHVIVLAGEGWNVG
VVGIVASKLLERYYRPVIILDIHPETGNCKGSARSIPGLDIYSALSSCSELMDHYGGHPA
AAGMSLHRDRLEEFAAALESYASGVLREEHLVPVTQTDGEYKLADLSLQAAEELELLAPF
GMSNPLPKFIVRGAVVQETRTMGQGSRHLKLTLRQGGVTTDAVAFGKGELAELLPRGTVI
DVLAELSINEWNGSRKVQLMLQDLAVPEPQLFDYRGARDSAVKMQRLRSVLLPPAGGQAR
IAALVRKNRLHERAQPEWQGVPFWVYDEYNGIAPADSPDSDADSVTLVCLLDMPESARQL
DAVLEAFPNVENIALLHSLPGERDRLLVPTREHFKAIYKWLAAIAASPVSEQEALLTLGR
KLPLSQRMLRMMLDVFEELEFIRKESGRIAFVTRPAARELTSSSRFVQLSELAEMERYFM
ESSPAELWQWMESRRLGVS
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
gtgcttcattccaaaaccaaatggcaatctccggcagccgaccccgctcttagcggggaa
ctggcccggagactttctatttctccccttgttgcttctttgttggccgcaaggggaatg
acggagcccggggaagcgctgcagtttatccgcggaggggctgatgaggagcatgatcct
tttctgctcaagggcatgaaggaggctgttccccgaatccgcagagcccttgaggacggg
gagcatattctcgtatacggcgattacgacgccgatggggtatccagcacatcgctgatg
attcacctgctgcgccggctgggagcatcctttgacatttatattccccaccgctccaat
gaaggctacgggctgcataatcatgcgctggattgggcactgcagcagggagttacgctg
atccttaccgtagacacaggaatcagcgcctgcagtcagattgcttatgccaatgagctc
ggtatggacgtcatcgttacggaccaccatgagcctcccgaggttctgccgcctgcatac
tcgctcattaaccccaagctgccggattgcccgtatccgttcaaaggactgtgcggagtc
ggggtagcctacaagctggctcaggcccttcttggcacagacgtccccgaggaatggaca
gaaatcgttgcgattggaacgatcgccgacctgatgccgctgctcggcgagaaccgggca
ttggtccggcgggggcttgccagtatgcgccaaacccggtatcccgggattcgggcgctg
ctggaagtgagcgcggttccggtcgagcgggtcggggcgatcaatgtcgcttttgcactg
gctccccggatcaatgccagcggaaggctggatcacgcgggaagagcggtctccctgctg
acgacagaagacgcagatgacgcggaactgcttgcctcggaattggacatgctgaataaa
gagcggcaaatggtcgtggagcgcatcgttacggaagcggcggccgctcttgaggagaag
atgaacggcggccctgttccgcatgtcattgtgttggcgggggaaggctggaatgtcggc
gtagtcggcattgtggcctccaagcttctggagcggtattaccggccggtcatcattctg
gatattcatccggagacaggcaactgcaaaggttcagcccgttcgatacccggtctggac
atctactcggcgctgtcttcctgcagtgagctgatggatcattacggcggccatccggca
gccgcagggatgagcctgcaccgcgaccggctggaggagttcgcggccgcgcttgaatcc
tatgcgtccggcgtcctgcgggaggagcatctggtgccggtaacgcagacggacggcgag
tacaagctggccgatctgtcgcttcaagcggctgaggagcttgaactgctggccccgttc
ggcatgagcaatccgctgccgaaatttattgtacgcggtgcggtcgttcaagagacgcgc
acgatggggcagggcagccgtcatctgaagctgacgctgcgccagggcggcgtcacaacg
gacgccgtcgccttcggcaaaggggagcttgcggagctgcttccccggggaacggtgatc
gacgttctggcggagctgtcgatcaatgaatggaacggctcccgcaaggtgcagctcatg
ctgcaggacctggccgtaccggagccgcagctgttcgattaccgcggagcccgggattcc
gcggtgaaaatgcagcgcctgcgcagcgtgctgctgccgccggcaggcggacaggcgcgc
atagccgcactggtccgcaagaaccggctgcatgaacgtgcgcagccggaatggcaggga
gtaccgttttgggtatatgatgagtataacgggattgctccggcggacagtccggactcc
gatgcggattcggtcacgctggtctgcctgctggacatgccggaatcggcccggcagctg
gatgcagtgctggaggcttttccgaatgtcgaaaatatcgcgctccttcattcgctgcca
ggcgaacgggatcgtcttctcgtaccgacacgcgaacattttaaagccatctataaatgg
ctggcggcgattgccgcgagtccggtgtccgagcaggaagcgctgctgacgcttgggcgc
aagctgccgcttagccagcggatgctgagaatgatgctggatgtgttcgaggagcttgaa
tttatccggaaggaatcgggaaggatcgcttttgtgacccgcccggccgctcgggagcta
acctcttcgagccgattcgtccagcttagcgagctggcggagatggagcgctatttcatg
gagagcagtccggcggagctttggcagtggatggagtcgcgccggctgggcgtttcgtaa
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