Phreatobacter stygius: E8M01_04005
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Entry
E8M01_04005 CDS
T05955
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
pstg
Phreatobacter stygius
Pathway
pstg02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pstg00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
E8M01_04005
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pstg02000
]
E8M01_04005
Transporters [BR:
pstg02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
E8M01_04005
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
TetR_N
Motif
Other DBs
NCBI-ProteinID:
QCI69031
UniProt:
A0A4D7B7K2
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All DBs
Position
complement(854010..855572)
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AA seq
520 aa
AA seq
DB search
MVAWLTAFAGPASAQPGSAAGPAPQRGDYGFRVALNSDIRSTQPGVNRDFNTDSVVLHMV
EGLVALRENAAIAPMLAERIDLSADGRTYRFTLRQGVTFHNGAPLTSAEVVWSLKRYLDP
AVQWRCLPDFDGHGIAKVVDIGAPDAATVTITLEKPTALFLNTMARPDCGSTAIVHPASV
GADGVWRQPVGTGPYRLGEWRRGQYVDLLRFDGYVPLAGPRDGLAGAKIASAAQIRFMVI
PDSSAAKAALIAGAIDLMSDVASTELSDMRGRNDITVVSAPTMGLTGFLIQTRDPLLRDP
RIRRAMALAIDVPQIVASLVGTDAPDNPSPIPSSSAFHTAVQGVRPRHDIAAAKRLLAEA
GYRGQTIRMITNRRYPNVYDAAVAAQSMAAEAGLKIELEVLDWATQLDRYTRGDYQMMSF
LYSPRLDPSLSYEMLSGPKDSQPRKLWEDPEALALIRRSFEVADPAERQAIFDDLFQRFI
AQTPAIILFNQPDYLAHRKGLDGVASWAAAQTRLWGVSRR
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atcgtcgcctggctgacggcctttgccggcccggcatcggcgcaaccggggtctgctgcc
ggcccggcgccacagcgcggcgactatggtttccgggtggcgctgaattcggatatccgc
agcacccagcccggggtcaaccgcgatttcaacaccgacagcgtggtgctgcacatggtc
gaggggctggtcgcgctgcgcgagaacgccgcgatcgcgcccatgctcgccgagcgcatc
gacctttccgccgatggccgcacctatcgcttcacgctccgccaaggcgtgaccttccac
aacggcgcgccgctgacctcggccgaggtggtctggagcctcaagcgctatctcgatccg
gccgtgcaatggcgctgcctgccggatttcgacggccacggcattgccaaggtggtggat
atcggggcgcctgacgcggccaccgtgacgatcaccctggaaaagccgacggccttgttc
ctcaacaccatggcgcggcccgactgcggctccacggccatcgttcatccggcctcggtc
ggggcggacggcgtctggcgtcagccggtcggcaccggcccctaccggctcggcgaatgg
cgccgtggccaatatgtcgatctcctgcgcttcgacggctatgtgccgctggccggcccg
cgcgacggcctggccggcgccaagatcgcctcggccgcgcagatccgcttcatggtcatc
ccggattcctcggccgcgaaggccgctctgatcgccggcgccatcgacctcatgtcggat
gtcgcctcgaccgagctcagcgacatgcgcgggcgcaatgacatcaccgtcgtctcggcg
ccgaccatggggctgaccggcttcctgatccagacccgcgacccgctgctcagggatccg
cgcattcgccgggcgatggcgttggcgatcgacgtgccgcagatcgtggcgagcctggtc
ggcaccgacgcgccggacaatccatcgccgattccgagttccagcgcgttccatacggcg
gtgcagggcgtgcggccgcgccatgacatcgccgcggcgaagcggctcctggccgaagcc
ggctatcgcggccagacgatccggatgatcaccaaccggcgctatccgaatgtctatgac
gcggcggtcgccgcccagtcgatggcggccgaggctggcctcaagatcgaactcgaggtg
ctggattgggcgacccagctcgaccgctacacccgcggcgactatcagatgatgtccttc
ctctattcgccccggctcgatccgtcgctgtcctacgagatgttgtcgggcccgaaggac
agccagccgcgcaagctctgggaggaccccgaggcgctggcgctcatccgccgctccttc
gaggtggccgacccggccgaacgccaggcgatcttcgacgatctctttcagcgcttcatc
gcccagaccccggccatcatcctgttcaaccagccggactatctcgcccatcgcaagggt
ctcgacggcgttgcctcctgggccgccgcgcagaccaggctttggggcgtatccagacgc
tga
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