KEGG   Phreatobacter stygius: E8M01_07115
Entry
E8M01_07115       CDS       T05955                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
pstg  Phreatobacter stygius
Pathway
pstg00010  Glycolysis / Gluconeogenesis
pstg00020  Citrate cycle (TCA cycle)
pstg00260  Glycine, serine and threonine metabolism
pstg00280  Valine, leucine and isoleucine degradation
pstg00310  Lysine degradation
pstg00380  Tryptophan metabolism
pstg00620  Pyruvate metabolism
pstg00630  Glyoxylate and dicarboxylate metabolism
pstg00640  Propanoate metabolism
pstg00670  One carbon pool by folate
pstg00785  Lipoic acid metabolism
pstg01100  Metabolic pathways
pstg01110  Biosynthesis of secondary metabolites
pstg01120  Microbial metabolism in diverse environments
pstg01200  Carbon metabolism
pstg01210  2-Oxocarboxylic acid metabolism
pstg01240  Biosynthesis of cofactors
Module
pstg_M00009  Citrate cycle (TCA cycle, Krebs cycle)
pstg_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pstg_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
pstg_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:pstg00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    E8M01_07115 (lpdA)
   00020 Citrate cycle (TCA cycle)
    E8M01_07115 (lpdA)
   00620 Pyruvate metabolism
    E8M01_07115 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    E8M01_07115 (lpdA)
   00640 Propanoate metabolism
    E8M01_07115 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    E8M01_07115 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    E8M01_07115 (lpdA)
   00310 Lysine degradation
    E8M01_07115 (lpdA)
   00380 Tryptophan metabolism
    E8M01_07115 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    E8M01_07115 (lpdA)
   00670 One carbon pool by folate
    E8M01_07115 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pstg04147]
    E8M01_07115 (lpdA)
Enzymes [BR:pstg01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     E8M01_07115 (lpdA)
Exosome [BR:pstg04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   E8M01_07115 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 GIDA NAD_binding_8 DAO FAD_binding_2 FAD_binding_3 UDPG_MGDP_dh_N FAD_oxidored 3HCDH_N HI0933_like AlaDh_PNT_C TrkA_N
Other DBs
NCBI-ProteinID: QCI64036
UniProt: A0A4D7B374
LinkDB
Position
1546936..1548333
AA seq 465 aa
MKEISCKLLVIGAGPGGYIAAIRAGQLGIDTVIVERRRLGGTCLNIGCIPSKALIHAAEE
FDKAMHMAGGSSPLGISVGKPVLDLAKTIGWKDGIVGRLNSGVAGLLKKARVKIVGGRAR
FRDGKTVEVETETGLQVIRAETIVIATGSAPVELPFLPFGGPVVSSTEALALTKLPARLA
IVGAGYIGLELGMAFAKLGTTVTVVEAEPRILPQYDAELTRPVAKRLTELKIELLTGAKA
KALGPKGQALLVETAGGEDRRIDADKILVTVGRRPVTEGWGLEELGLDMDGRFLRIDDKC
RTSMRGIYAIGDVTGEPMLAHRAMAQGEMVAEIVAGHSRSWDKRAIPAVCFTDPEIVTAG
LSPDEARQAGIEIKTGQFPFTANARAMTKIGEAGFVRVVARADNHLVLGIQAVGHGVSEL
ATAFGLALEMGARLEDIAGTIHAHPTQGEGFQEAALKTLGHALHI
NT seq 1398 nt   +upstreamnt  +downstreamnt
atgaaagaaatctcctgcaagctgctggtgatcggcgccggccccggtggttatatcgcg
gccatccgcgccggccagctcggcatcgacaccgtcatcgtcgaacggcgccggctcggc
ggcacctgcctgaatatcggctgtatcccgtccaaggcactgatccacgcggcggaagaa
ttcgacaaggccatgcacatggccggcggatcgagcccgctcggcatcagcgtcggcaaa
cccgtgctcgatctcgccaagaccatcggctggaaggacggcattgtcgggcgcctgaac
agcggcgtcgccggtctgctgaaaaaggcccgggtcaagatcgtcggcggccgcgcccgc
tttcgcgacggcaagacggtggaggtcgagaccgagaccggtcttcaggtgatccgcgcc
gagaccatcgtgattgccaccggttcggcgccggtggaactgcccttcctgcctttcggc
ggaccggtggtctcatcgaccgaggcgctggccttgaccaaattgccggcgcggctcgcc
attgtcggcgccggttatatcgggctggagctcggcatggcctttgccaagctcggcacc
acggtgaccgtggtcgaggcggagccacgcatcctgccgcaatatgatgccgagctgacc
cgtccggtcgccaagcgcctgactgagctcaagatcgaactcctgaccggcgccaaggcc
aaggcgctcggccccaagggccaggccctgctggtcgagaccgccggcggcgaggatcgc
cgcatcgacgccgacaagatcctggtgaccgtcggccgccggccggtgaccgagggctgg
ggcctggaagagctcggcctcgacatggacggccggttcctgcgcatcgatgacaagtgc
cggacatcgatgcgcggcatctatgcgatcggtgacgtcaccggcgagccgatgctggcg
caccgcgccatggcgcagggcgaaatggtcgccgagatcgtcgccggccactccaggagc
tgggacaagcgcgccattccggcggtctgcttcaccgacccggaaatcgtcaccgccggc
ctctcgcccgacgaagcccggcaggccggcatcgagatcaagaccggccagtttcccttc
accgccaatgcccgcgcgatgaccaagatcggcgaggccggtttcgtccgggtcgtcgcc
cgcgccgacaaccatctggtccttggcatccaggcggttggccacggcgtttccgagctt
gccacggccttcggcctggcgctggaaatgggcgcgcggctcgaagacattgccggcacg
atccacgcccatccgacccagggcgagggcttccaggaggcggccctgaagacgctcggc
catgcgctgcatatctga

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