Phreatobacter stygius: E8M01_08605
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Entry
E8M01_08605 CDS
T05955
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
pstg
Phreatobacter stygius
Pathway
pstg02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pstg00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
E8M01_08605
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pstg02000
]
E8M01_08605
Transporters [BR:
pstg02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
E8M01_08605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
HAT
Motif
Other DBs
NCBI-ProteinID:
QCI64296
UniProt:
A0A4D7B3T0
LinkDB
All DBs
Position
complement(1880931..1882583)
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AA seq
550 aa
AA seq
DB search
MDFGRGWRSKGTRRFNRIWLAGALIAAGLLTTAGAEARTVRWARSLDAQTLDPMSANIGP
TTVVAHQLYEPLVHRGYDGKLVPTLATEWRNLPDDPTVWEVKLRQGVKFHNGTDFTADDV
LFSFDRARSPNSDFRGLITSIESVTKIDAHTIRIKTKAPNPLLFENLTNIFMMSKAWAEA
NNAALPQNIRERQENGATRQAMGTGAFQLISREPDVRTVMRRFEGYWGRNQFPLEVSELI
LVPIQQDATRIAALLSGEVDVVHDVPVQDISRLQQSQGVKVNTGPENRVIFLGFNVGPAE
LKTSDIKGKNPFADRRVRAAVNIAVNREAITRVVMRGQGVPIGYVGTNFISGYSPEIAAV
PRLDVAAANKALDEAGYPRRADAGNTRFSVSLQCPNNRYVADENICQAVVGMMGQIGIKV
NLVAKPAAQHFPELQREELDFYLVGWGIPTYDAEYVLTFMFHTRSASNGTWNGTRYSNPS
LDTRMIALQTMPDVTRRNAEIAELQRILKEETIYVPLHVQSISHAMRGGLQMQVHPDAQA
WFKYFRFVTS
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggatttcggacggggttggcgttccaagggaacgcgacgcttcaacaggatctggctg
gccggcgcgctgatcgcggccggcctgctgacgacggccggcgccgaggcgcgcacggtg
cgctgggcccgttcgctcgatgcccagacgctcgacccgatgtcggccaatatcggcccg
accacggtcgtcgcccatcagctgtacgagccgctggtccatcgcggctatgacggcaag
ctggtgccgacgcttgccaccgagtggcgcaacctgcccgacgacccgacggtctgggag
gtcaagctccgccagggcgtcaagttccacaacggcaccgatttcaccgccgacgacgtg
ctgttctcgttcgatcgcgcgcgctcgccgaattccgatttccgtggcctgatcacctcg
atcgaaagcgtcaccaagatcgacgcccatacgatccggatcaagaccaaggcgccgaac
ccgctgctgttcgagaacctcaccaatatcttcatgatgtcgaaggcctgggccgaggcg
aacaatgcggcactgccgcagaacatccgcgagcgccaggaaaatggcgcgacccgccag
gccatgggcaccggcgccttccagctgatctcgcgcgagccggacgtgcgcaccgtgatg
cgccgcttcgagggctattggggccgcaaccagttcccgctcgaagtgtccgaattgatc
ctggtgccgatccagcaggacgccacccggattgccgccttgctgtcgggcgaggtcgac
gttgtccacgacgtgccggtgcaggacatcagccgcctgcagcagagccagggcgtcaag
gtcaacaccggcccggaaaaccgcgtcatctttctcggcttcaatgtcggtccggccgaa
ctgaaaacctccgacatcaagggcaagaaccccttcgccgaccggcgtgtcagggccgcc
gtcaatatcgctgtcaaccgcgaggcgatcacccgggtggtcatgcgcggccagggcgtg
ccgatcggttatgtcggcaccaatttcatctccggctattcgcccgagatcgcggcggtg
ccgcgcctggatgtggcggccgccaacaaggcgctcgacgaggccggttatccgcgccgg
gccgatgccggcaacacccgcttctcggtgtcgctgcaatgccccaacaaccgctatgtc
gccgacgagaacatctgccaggcggtggtgggcatgatgggccagatcggcatcaaggtg
aacctggtcgccaagccggccgcccagcacttccccgagctgcagcgcgaggagctcgac
ttctacctggtcggctggggcattccgacctatgacgccgaatatgtgctgaccttcatg
ttccacacccgctcggcatcgaacggcacctggaacggcacgcgctattccaacccgtcg
ctcgacacccgcatgatcgccctgcagaccatgcccgatgtcaccaggcgcaatgccgaa
atcgccgagctgcagcgcatcctgaaggaagagaccatctacgtgccgctgcatgtccag
tcgatcagccacgccatgcgcggcggattgcagatgcaggtgcatccggatgcgcaggcc
tggttcaagtattttcgctttgtgacgtcgtga
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