Phreatobacter stygius: E8M01_09560
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Entry
E8M01_09560 CDS
T05955
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
pstg
Phreatobacter stygius
Pathway
pstg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pstg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
E8M01_09560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pstg03400
]
E8M01_09560
Enzymes [BR:
pstg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
E8M01_09560
DNA repair and recombination proteins [BR:
pstg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
E8M01_09560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
UvrD_C_2
SH3_13
Viral_helicase1
HHH_5
Helicase_RecD
AAA_11
PIF1
AAA_22
NTPase_1
nSTAND3
AAA_29
AAA_16
AAA_28
T2SSE
RsgA_GTPase
TraI_hel_assoc_N
cobW
ABC_tran
NACHT
UvrD-helicase
ATP-synt_ab
NPHP3_N
ATPase_2
DEAD
AAA_23
AAA_5
TrwB_AAD_bind
AAA_17
SLFN-g3_helicase
AAA_24
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
QCI64457
UniProt:
A0A4D7B8S1
LinkDB
All DBs
Position
2097225..2099411
Genome browser
AA seq
728 aa
AA seq
DB search
MRESAASSSESPVETLTGTVERVTFHSPATGFAVLKVRVRGRPQPVSIVGTTAAVAAGEM
MTAQGTWVNDRTHGLQFKASALVTAPPASKDGIERYLSSGAIKGIGIATAHKIVQAFGKR
TFEVLDNEPHRLSELPGLTTARIKRITESWAEDRIVRDLGVFLQEHGLGLGQATRVFRAL
GPEAIGLIRQDPYRLARDVRGIGFLTADQVATSLGLKRDAPERLRAGITFALQEARDDGH
CGLPREAAMSLAARLLDADEDLIEQAADTEVANRNLIADTIGGAPHLFLRELHRAEKVIG
DKLRDLIVGEPPWGRIDLATEVPRVEARTGKALAPSQREALNVILGAKVSVITGGPGVGK
TTLLDTILKILTRQDVSVVLAAPTGRAAKRMTEQTGIEAKTIHRLLEIDPEFGAFSRGRD
NLLACDLLVVDETSMVDVPLMMALVEALPTASALLLVGDVDQLPPVGPGQVLADVIASDL
VPVARLTEVFRQAEASRIIANAHRINRGEMPELPAPGVQSDFYFVEMNSPEDGLAKIIEI
VKERIPRRFGLDPMRDVQILAPMNKGVLGARNINVEVQKVLNPSQGRSVERYGWTYAAGD
RVMQTANDYDRDVFNGDLGSVLRIDQEEGELVALFDGRQVSYSFAELENLMPAYATTIHK
SQGSEYPAVVVPVTMQHYAMLARNLIYTAVTRGRSLVVMVGETRALKIAVGGGRSKPRTT
KLREWLTT
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgagagcgctgcctcatcgtctgaaagtccggtcgagacgctgaccggtaccgtc
gaacgcgtgacgttccattcgcccgcgaccggattcgcggtgctgaaggtgcgtgtccgc
gggcggccgcagccggtttcgatcgtcggcacgacggcggcggtggccgccggcgagatg
atgaccgcgcaaggcacctgggtgaacgaccgcacccatggcctgcagttcaaggcgagc
gcgctggtcaccgccccgcccgcctcgaaggacggcatcgaacgctacctgtcgtcgggc
gcgatcaagggcattggcatcgccaccgcccacaagatcgtccaggccttcggcaagcgc
accttcgaggtgctcgacaacgaaccgcatcggctgagcgagctgccgggcctgaccacg
gcccggatcaaacggatcaccgaaagctgggccgaggatcgcatcgtgcgcgatctcggc
gtgttcctgcaggagcacggccttggtctcggccaggcgacacgggtgttccgcgcgctc
ggtccggaagcgatcgggctgatccgccaggatccctaccggctggcccgcgacgtgcgc
ggcatcggcttcctcaccgccgaccaggtggcgacctccctcggcctgaagcgcgacgcg
ccggagcggctgcgcgccggcatcaccttcgccttgcaggaggcgcgcgacgacggccat
tgcggcctgccgcgcgaggccgccatgtcgctggccgcccgtctgctcgatgccgacgag
gacctgatcgaacaggccgccgataccgaggtggcgaaccgcaacctgattgccgacacg
atcggtggcgcgccgcatctgttcctgagggaattgcatcgcgccgagaaggtcattggc
gacaagctcagggacctgatcgtcggcgaaccgccctgggggcgcatcgatctcgcaacc
gaggtgccgcgggtcgaggcccgcaccggcaaggcgctagcgccgtcgcaacgcgaggcc
ctgaacgtcatcctgggcgccaaggtctcggtgatcaccggcggcccgggcgtcggcaag
accacgctgctcgacaccatcctgaagatcctcacccgccaggacgtctcggtggtgctc
gccgccccgaccggccgcgccgccaagcgcatgaccgagcagaccggcatcgaggccaag
accatccaccgcctgctcgagatcgatccggaattcggcgccttctcgcgcggccgcgac
aatctcctggcctgtgacctgctggtggtcgacgaaacctcgatggtcgacgtgcccttg
atgatggcgctggtcgaggctctgccgacggcatccgccctgctgctggtcggcgacgtc
gatcagctgccgccggtcggcccgggccaggtgctcgccgatgtcatcgcctccgatctc
gtgccggtcgcccgcctgaccgaggtgttccgtcaggccgaggcgagccgcatcatcgcc
aatgcccaccggatcaaccgcggcgagatgccggaactgccggcgcccggcgtgcagagc
gacttctatttcgtcgagatgaactcgcccgaggacgggctcgccaagatcatcgaaatc
gtcaaggagcgcattccccgccgcttcggcctcgacccgatgcgtgacgtgcagatcctg
gcgccgatgaacaagggcgtgctcggcgcccgcaacatcaatgtcgaggtccagaaggtc
ctgaacccgtcgcagggccgctcggtcgaacgttatggctggacctatgccgccggcgac
cgggtcatgcagacggccaatgactatgaccgcgacgtgttcaacggcgacctcggctcg
gtgctgcgcatcgaccaggaagaaggcgagctggtcgctctcttcgacggccggcaggtg
agctattccttcgccgaactcgaaaacctcatgccggcctatgccaccaccattcacaag
agccagggctcggaatatccggccgtggtggtgccggtgaccatgcagcattacgccatg
ctggcgcgcaacctgatctatacggcggtgacccgcggccgctcgctggtggtcatggtc
ggcgagacgcgcgccctgaagatcgcggtcggcggcgggcggtcgaagccgcgcaccacc
aagctcagggaatggctgacgacctga
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