Phreatobacter stygius: E8M01_11940
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Entry
E8M01_11940 CDS
T05955
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
pstg
Phreatobacter stygius
Brite
KEGG Orthology (KO) [BR:
pstg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pstg03400
]
E8M01_11940 (addB)
Enzymes [BR:
pstg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
E8M01_11940 (addB)
DNA repair and recombination proteins [BR:
pstg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
E8M01_11940 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
QCI64872
UniProt:
A0A4D7B9Z2
LinkDB
All DBs
Position
complement(2598659..2601754)
Genome browser
AA seq
1031 aa
AA seq
DB search
MPSNPHVLTIPASRPHLATLARAVLDGRVIAGWPDRSDPLSLAAGTILLPNRRACRAMHD
AFLAVASDQAMLLPRIAPIGDIDEDEWDFADPDPLDTLGIDAIGPAMASLDRRLTLAGLV
RAWAASVDRAVMKLSAADPLIVSTSTGDALALAADLMRLMDQVETERVPWSNLDRIVETG
LDTFWTMTRSFLGIATEAWPAHLAANGLEEPAVRRDRLIAAETIRLAASPGPIIAAGSTG
SILATRDLLKAIAHHPKGALILPGLDRGLDAASWEAIGGTNGPASQVPTSHGHPQFGLKR
LIEHVGVTRDAVGDLAGADGHGRETLLSEAMRPAATTELWGAGIHAPTEAMLDGLTVVEA
ANERDEALGVALVLREIAEDPKATAALVTPDRALARRVLAELSRWNVTVDDSGGRPLAGT
PVAAVARLVAALVFDDPAPATLLALIAHPALDHGLDPGRRDQAIAAIELTTLRGLRPSGG
LDGYLAKLDKVMPSASPRPADAASRVSAEALADGRALLGRIVAALAPLMALNQASETPLA
AFAASHGAVLDALHLDAEAQGGEEIASVLAKASGATAASFALPPGDYCSVFDALIATETV
RVPARPGARIRVLGLPEARLLDAGTVVLAGLVEGSWPGEAKLDPWLNRAMRTAFGIDPPE
RRIGLAAHDFCQLLGNRRVVLTRAAKSGGVPTVRSRWLQRLAAVLGDDVWQSLVAKGETV
LALAQRLDRPAVIRPVARPAPAPPLELRPARLPVTAIETWLRDPYAIYAQHVLKLSALDN
LDEVPGAAERGTVIHGVLAAFTQEVQAKGFAADPVGRLVALGRDHFAPYWDDPSVRAIWW
PRFLRIAQWFAAEDQSRRADLIDVHAEIKGRLEWETPAGRRFVLTTSADRIDIRKDGMAE
IVDYKTGQPPSANQVQSGLAPQLALEAAVLKAGGFFGVPADTPIGALVYAKLGGRDPAGE
FLPVRMADKSADELVVETITRLRELVAAFENPAQGYLSWAIPQFVGGRSNDYAHLARVKE
WSAAGGGGDGE
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcgaacccgcatgtcctgacgattcccgcctccaggccgcatctggcgaccttg
gcgcgggctgtcctcgacggccgtgtcatcgccggctggccggaccggtccgacccgctg
tcgcttgccgccggcaccatcctcttgcccaaccggcgcgcttgccgggccatgcacgac
gccttcctggcggtcgcctcggaccaggccatgctgctgccgcgcatcgcaccgatcggt
gacatcgacgaagacgaatgggatttcgccgacccggatccgctcgatacgctcggcatc
gacgccatcgggccggccatggcctcgctcgaccggcggctgacgcttgccggcctggtg
cgcgcctgggcggccagcgtcgaccgggcggtgatgaagctgtcggccgccgatccgctg
atcgtctcgacttcgaccggagatgccctggcgctcgccgccgatctgatgcggctgatg
gaccaggtcgagaccgagcgcgtgccctggtccaatctcgaccggatcgtcgagaccggc
ctcgacacgttctggaccatgacgcggagctttctcggcattgcgacggaagcctggccg
gctcatctcgccgccaacgggttggaggagccggcggttcgccgcgaccggctgatcgcc
gccgagacgatccggctggcggcctcccccgggccgatcattgcggccggctcgaccggc
tcgatcctggcgacccgcgacctcctgaaagcgatcgcccaccatcccaagggcgcgctg
atcctgcccgggctcgaccggggtctcgatgccgcctcctgggaggccattggcgggacc
aatggcccggcctcgcaagtcccgacgtcccacggccatccgcaattcggcctgaagcgg
ctgatcgaacatgtcggcgtgacgcgcgacgcggtcggggatctcgccggagcggacggc
catggccgcgagacgctgctctccgaagcaatgcgcccggccgcgaccaccgaactctgg
ggcgccggcatccatgcaccgaccgaggccatgctcgacggactgaccgtggtcgaagcg
gcgaacgagcgcgacgaggcgctcggcgtggcgctggtgctgcgtgagatcgccgaagat
cccaaggccaccgccgccctggtcacgccggaccgggcgctggcgcgccgggtgctcgcc
gaactgtcgcgctggaacgtcaccgtcgacgattccggtggccggccgctcgccggaacg
ccggtggcggcggtcgcccgcctggtcgccgcgctggtcttcgacgatccggccccggcg
acattgctggccttgatcgcgcatcccgcgctggaccacgggctcgatccgggtcgccgc
gaccaggccatcgccgcgatcgagctgaccacgctgcgcggcttgcgtccgtcgggcggg
ctcgacggctatctcgccaagctcgacaaggtcatgccgtcggcttcgccgcggcccgcc
gatgcagcgagccgggtgagcgccgaggcgctcgccgacgggcgcgctctgctcggccgg
attgtcgcggctctggcgccgctgatggcgctgaaccaggccagcgagacgccactggcc
gcctttgccgccagccatggggcggttttggatgcgctccacctcgacgccgaggcgcaa
ggcggcgaggagatcgcctcggtgctggccaaggcgagcggcgcgacggcggcgtctttc
gctttgccgccgggcgattattgcagcgtcttcgacgccttgatcgccaccgagacggtt
cgtgttccggcgcggcccggcgcgcgcatccgcgtcctcggcctgcccgaagcccgtctg
ctcgatgccggcactgtggtgctggccgggctggtcgagggctcctggccgggtgaggcc
aagctcgatccctggctgaaccgggccatgcgcacggccttcggcatcgatccgccggag
cggcgcattggccttgccgcccacgacttctgccagcttctgggcaatcgccgcgtcgtg
ctgacgcgcgcggccaagagcggcggggtgccgacggtcaggtcgcgctggctgcagcgg
ctcgccgcggtgcttggcgacgacgtctggcagtcgctcgtcgccaagggcgaaacggtg
ctcgccctggcgcagcggctcgaccggcccgccgtgatccggcccgtcgcccggccggcg
ccggcgccaccgctggagctcaggccggcgcgcttgccggtgacggcaatcgaaacctgg
ctgcgtgatccctatgccatctatgcccagcacgtgctgaagctcagcgcgctcgacaat
ctcgacgaggttccgggcgccgccgagcgcggcacggtgatccatggcgtgctggcggcc
tttacccaggaggtgcaggccaagggcttcgccgccgatccggtcggccgcctcgtggcg
ctcgggcgcgaccatttcgcaccctattgggacgatccctcggtcagggccatctggtgg
ccgcgcttcctccgcatcgcgcaatggttcgcggccgaggaccagtcgcgccgcgccgac
ctcatcgacgtccatgccgagatcaagggccggctggaatgggaaacgccggccggccgg
cgcttcgtgctcaccacgtcggccgatcgcatcgacatccgcaaggacggcatggcggag
atcgtcgattacaagaccggccagccgccgagcgccaaccaggttcaatccgggctggca
ccacaattggcgctggaagccgcggtgctgaaagccggcggcttttttggcgtgccggcc
gatacgccgatcggcgcgctggtctatgccaagctcggcgggcgcgatcccgccggcgaa
ttcctgcccgtccgcatggccgacaagagcgccgacgagctggtggtcgagaccatcacc
cgcctgcgcgaactggtcgcagcctttgaaaatccggcccagggctatctgtcctgggcg
atcccgcaattcgtcggcgggcgttccaacgactatgcccatctcgcccgggtcaaggaa
tggtcggccgccggcggtgggggagacggcgaatga
DBGET
integrated database retrieval system
