Phreatobacter stygius: E8M01_13475
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Entry
E8M01_13475 CDS
T05955
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pstg
Phreatobacter stygius
Brite
KEGG Orthology (KO) [BR:
pstg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pstg03016
]
E8M01_13475 (truB)
Enzymes [BR:
pstg01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
E8M01_13475 (truB)
Transfer RNA biogenesis [BR:
pstg03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
E8M01_13475 (truB)
Prokaryotic type
E8M01_13475 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
DUF4884
Motif
Other DBs
NCBI-ProteinID:
QCI65136
UniProt:
A0A4D7B5Z4
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All DBs
Position
2915165..2916088
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AA seq
307 aa
AA seq
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MNQPRSKKIDVHGWIVLDKDLGQTSTHAVSAVRRLFNAKKGGHAGTLDPLASGLLPIALG
EATKTVPFVMDGRKTYRFTVTWGSETTTDDTEGEVTARSDLRPSREAVEALLPRYTGTIM
QVPPKFSAIKVDGERAYDLARDGEEVTLAARPITIDSLTLVSLSETSAEFEAECGKGTYV
RAIARDIGRDLACFGHVTALRRTRVGPFGENDTVTLEELRELLDGKIDSQTLDDALLPVE
AALAEVPEVQVTRDVAARLVRGQSAILRGRDAPVGGTVWVSAGGDPIAVCEVERGELVPK
RVFVFQA
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgaaccagccgcgctcgaagaagatcgacgtccatggctggatcgtgctcgacaaggat
ctcggccagacctcgacccatgccgtctcggcggtccgccgcctgttcaacgccaagaag
ggcggccatgccggcacgctcgacccgctcgcctcgggcctcctgccgatcgcgctcggc
gaagccaccaagaccgtgcccttcgtcatggacggccgcaagacctatcgcttcacggtg
acctgggggtcggagaccacgaccgacgacaccgagggcgaggtaaccgcccgctccgac
ctgcgtccgagccgcgaggcggtcgaggcgctgctgccccgctataccggcaccatcatg
caggtgccgccgaaattttcggccatcaaggtcgatggcgagcgtgcttacgatctcgcc
cgcgacggcgaggaggtgacgctcgccgcccggccgatcaccatcgacagcctgaccttg
gtatcgctctccgagacctcggccgagttcgaggcggaatgtggcaagggcacctatgtc
cgggccatcgcccgcgatatcggtcgcgacctcgcctgtttcggccatgtcaccgcgctg
cgccgcacccgcgtcgggccgttcggcgagaacgacaccgtgacgctggaggaactgcgc
gaattgctcgacggcaagatcgacagccagaccctcgacgatgccttgctgccggtcgag
gcggccctggccgaggtgccggaggtgcaggtgacccgtgatgtcgccgcgcggctggtg
cgcggccagagcgccattctgcgcgggcgcgacgcgccggtcggcggaaccgtatgggtt
tccgccggtggcgatccgatcgcggtctgcgaagtcgagcgcggcgagctggtgccgaag
cgggtctttgtcttccaggcgtga
DBGET
integrated database retrieval system
