Phreatobacter stygius: E8M01_13980
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Entry
E8M01_13980 CDS
T05955
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pstg
Phreatobacter stygius
Pathway
pstg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pstg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E8M01_13980 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pstg03019
]
E8M01_13980 (pnp)
03016 Transfer RNA biogenesis [BR:
pstg03016
]
E8M01_13980 (pnp)
Enzymes [BR:
pstg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
E8M01_13980 (pnp)
Messenger RNA biogenesis [BR:
pstg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
E8M01_13980 (pnp)
Transfer RNA biogenesis [BR:
pstg03016
]
Prokaryotic type
tRNA degradation factors
E8M01_13980 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
OB_RRP5_4th
KH-I_KHDC4-BBP
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
QCI65222
UniProt:
A0A4D7BAT3
LinkDB
All DBs
Position
3017628..3019769
Genome browser
AA seq
713 aa
AA seq
DB search
MFDIHREEITWGGRKLVLETGKIARQAHGAVLATYGETTVLATVVSNFEPKAGIDFFPLT
VNYQEKYFAAGRIPGGYFKREGQPTERETLVSRLIDRPIRPLFVDGYKNETQVIVTTLSH
DMENDPDIVAMVAASAALTLSGVPFMGPVGAARVGYIDGEYVLNPYVDDIKDSKLDLVVA
GTADAVLMVESEAQELSEEVMLGAVMFGHKYFQPVINAIIALAEKAAKEPRDFTPPDYSA
LEKDMLALVEKDLRAAYSIREKTARYAAVGEVKKTALAQFAGDAAEGKLDKQVVAGVFKE
LEAKVVRLNILDTGSRIDGRDLKTVRPIVSEVGILPRTHGSAVFTRGETQALVVTTLGTA
EDEQFIDALNGTYKENFLLHYNFPPYSVGEAGRMGRPGRREVGHGKLAWRAVRPMLPEKH
EFPYTIRVVSEVTESNGSSSMATVCGASLALMDAGVPIKRPIAGIAMGLILEGERFAVLS
DILGDEDHLGDMDFKVAGSSEGITSLQMDIKIAGITEEIMKVALGQAKDGRAHILGEMAN
ALTAARSELGEHAPRIESFKIPTDKIREVIGTGGKVIREIVEKTGAKINIEDDGTVKVAS
ANGESIRAAVNWIKSITQEPELGQIYDGTVVKVVDFGAFVNFFGSRDGLVHISQLANQRV
GKVTDVVKEGDKVKVKLLGFDDRGKTRLSMKIVDQTTGEDLEKKQKEEGDAAE
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgttcgatattcatcgcgaggagatcacctggggtggtcgcaagctggtcctcgagacc
ggcaagatcgcccgccaggcgcacggcgccgtgctcgccacctatggcgagaccaccgtg
ctcgccaccgtcgtgtccaatttcgagccgaaggccggcatcgacttcttcccgctgacg
gtcaactatcaggaaaaatacttcgcggccggtcgcattcccggcggctatttcaagcgt
gaaggccagccgaccgagcgcgagacgctggtgtcgcgcctgatcgaccggccgatccgg
ccgctgttcgtcgacggctacaagaacgagacgcaggtgatcgtcaccacgctctcgcac
gacatggaaaacgatcccgacatcgtcgccatggtcgccgcttccgcggcgttgaccctg
tccggcgtgcccttcatgggcccggtgggtgccgcccgcgtcggttacatcgacggcgaa
tacgtgctcaacccctatgtcgacgacatcaaggattcgaagctcgatctggtcgtcgcc
ggcaccgccgacgccgtgctgatggttgaatcggaagcccaggagctgtccgaagaggtc
atgctcggcgccgtcatgttcggccacaaatatttccagccggtcatcaacgcgatcatc
gcgctggccgagaaggccgccaaggaaccgcgcgacttcaccccgcccgactattcggcg
ctggagaaggacatgctggcgctggtcgagaaggacctgcgcgccgcctattcgatccgc
gagaagaccgcccgttatgccgcggtcggcgaagtcaagaagacggcgctggcccagttc
gccggcgatgccgccgaaggcaagctggacaagcaggtggttgccggcgtgttcaaggag
ctcgaagccaaggtcgttcgcctgaacatcctcgacaccggctcgcgcatcgacggccgt
gacctgaagaccgtccgtccgatcgtctcggaagtcggcatcctgccgcgcacccatggt
tcggccgtgttcacccgcggcgagacccaggcactggtggtcaccacgctcggcaccgcg
gaagacgagcagttcatcgacgcgctcaacggcacctacaaggaaaacttcctgctgcac
tacaacttccccccctattcggtgggtgaagccggccgcatgggccgtccgggccgccgc
gaagtcggccacggcaagcttgcctggcgcgcggtgcgtccgatgctgccggagaagcac
gagttcccctacaccatccgcgtcgtttccgaggtcaccgagtccaacggttcctcgtcg
atggccaccgtctgcggcgcctcgctggcgctgatggacgccggcgtgccgatcaagcgt
ccgatcgccggtatcgccatgggcctgatcctcgagggcgagcgcttcgcggtgctgtcc
gacatcctcggcgacgaggatcacctcggcgacatggacttcaaggtggccggttcgtcc
gagggcatcacctcgctccagatggacatcaagatcgccggcatcaccgaggagatcatg
aaggtcgccctcggccaggccaaggacggccgcgcccatatcctgggcgagatggccaat
gcgctcaccgccgcccgttcggagctcggcgaacatgcgccgcgcatcgagagcttcaag
atcccgaccgacaagatccgcgaagtgatcggcaccggcggcaaggtgatccgcgagatc
gtcgagaagaccggcgccaagatcaatatcgaggacgacggcaccgtgaaggtggcgtcg
gccaatggcgaatcgatccgcgccgcggtcaactggatcaagtcgatcacccaggagccc
gagctcggccagatctatgacggcaccgtcgtcaaggttgtcgatttcggcgccttcgtg
aacttcttcggctcgcgtgacggcctcgtccacatctcgcagctcgccaatcagcgggtc
ggcaaggtgaccgacgtggtcaaggaaggcgacaaggtcaaggtgaagctgctcggcttc
gacgatcgcggcaagacccgcctgtcgatgaagatcgtcgaccagacgaccggcgaagac
ctcgagaagaagcagaaggaagagggcgacgccgccgagtga
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