Phreatobacter stygius: E8M01_16680
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Entry
E8M01_16680 CDS
T05955
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
pstg
Phreatobacter stygius
Pathway
pstg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pstg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E8M01_16680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pstg03019
]
E8M01_16680
Messenger RNA biogenesis [BR:
pstg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
E8M01_16680
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Motif
Other DBs
NCBI-ProteinID:
QCI65701
UniProt:
A0A4D7AZD9
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All DBs
Position
3538688..3539200
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AA seq
170 aa
AA seq
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MCGGDATYRPNVGIALFDVRGRVLIARRTSDDGPEVIAAGFEWQMPQGGVEPGEDIEAAA
RRELAEETGVTSTVLIGMLPEQLSYDWPPYHGPPHRLDRWRGQRQSWLAFRFTGTDQDID
LSHAAPGEPPEFDLWRWERLERLPDLVVPYKRAIYARLAAEFAVFAARRA
NT seq
513 nt
NT seq
+upstream
nt +downstream
nt
atgtgcggtggtgacgcaacctaccggccgaatgtcggcattgcgttattcgatgttcgc
ggccgggtcttgatcgcccggcgcaccagcgatgacgggccggaagtgatcgccgccggc
ttcgaatggcagatgccgcaaggcggcgtcgagcccggcgaggacatcgaggcggcggcg
cgccgggagcttgccgaggagaccggcgtcaccagcacggtgctcatcggcatgctcccg
gaacagctcagctatgattggccaccctatcacggtccgccgcatcggctcgaccgctgg
cgcggccagcggcagagctggctcgcttttcgcttcaccggaaccgaccaggacatcgac
ctgtcgcatgccgcgcctggcgagccgccggaattcgatttgtggcgttgggagaggctc
gagcgtctgccagacctggtcgtgccctacaagcgcgccatctatgcgcggctggcagcc
gaattcgccgtctttgccgcgcggcgcgcgtga
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