Phreatobacter stygius: E8M01_19045
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Entry
E8M01_19045 CDS
T05955
Symbol
sucD
Name
(GenBank) succinate--CoA ligase subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
pstg
Phreatobacter stygius
Pathway
pstg00020
Citrate cycle (TCA cycle)
pstg00640
Propanoate metabolism
pstg00660
C5-Branched dibasic acid metabolism
pstg00720
Other carbon fixation pathways
pstg01100
Metabolic pathways
pstg01110
Biosynthesis of secondary metabolites
pstg01120
Microbial metabolism in diverse environments
pstg01200
Carbon metabolism
Module
pstg_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pstg_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
pstg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
E8M01_19045 (sucD)
00640 Propanoate metabolism
E8M01_19045 (sucD)
00660 C5-Branched dibasic acid metabolism
E8M01_19045 (sucD)
09102 Energy metabolism
00720 Other carbon fixation pathways
E8M01_19045 (sucD)
Enzymes [BR:
pstg01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
E8M01_19045 (sucD)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
QCI66121
UniProt:
A0A4D7B096
LinkDB
All DBs
Position
complement(4053544..4054434)
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AA seq
296 aa
AA seq
DB search
MSILITKKTKVITQGFTGKNGTFHSEQAIAYGTKMVGGVAPGKGGQIHLNLPVFDTVAEA
RDKTGADASVVYVPPPGAADAICEAIDAEIPLIICITEGIPVQDMIKVKRALEGSKSRLI
GPNCPGVVTAGESKIGIMPANIFKKGNVGIVSRSGTLTYEAVFQTTQEGLGQTTAVGIGG
DPVKGTEFIDMLEMFLADPKTESIVMIGEIGGSAEEDAAQFIRDEAKRGRKKPMVGFIAG
RTAPPGRRMGHAGAIISGGKGGADDKIAAMEAAGIRVSPSPARLGKTLVDLLKKKR
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgtccattctcatcactaagaagacgaaggtcatcacccagggcttcaccggcaagaat
ggcacgttccattccgagcaggcgatcgcctatggcaccaagatggtcggcggcgttgct
ccgggcaaaggcggccagatccatctcaatctgccggtgttcgatacggtggccgaggcg
cgcgacaagaccggcgccgacgcttcggtggtctatgtgccgccgccgggcgccgcggat
gccatctgcgaggcgatcgatgccgagatcccgctgatcatctgcatcaccgagggcatt
ccggtgcaggacatgatcaaggtcaagcgcgcgctggaaggctcgaaatcgcggctgatc
ggcccgaactgcccgggtgtcgtcaccgccggcgaatcgaagatcggcatcatgccggcc
aatatcttcaagaagggcaatgtcggcatcgtctcgcgctcgggcacgctgacctatgaa
gcggtgttccagaccacccaggaaggcctcggccagaccaccgcggtcggcatcggcggc
gatccggtcaagggcaccgaattcatcgacatgctggaaatgttcctggccgatccgaag
accgagtcgatcgtgatgatcggcgagatcggcggctcggcggaggaagatgccgcccag
ttcatccgggacgaggccaagcgcggccgcaagaagccgatggtcggcttcatcgccggc
cgcaccgcgcctcccggccgccgcatgggccatgccggtgcgatcatctcgggcggcaag
ggcggcgccgacgacaagatcgccgccatggaggccgccggcatccgcgtctcgccgtca
ccggcgaggctcggcaagacgctggtcgaccttctgaagaaaaagcgctga
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