Phreatobacter stygius: E8M01_19170
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Entry
E8M01_19170 CDS
T05955
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
pstg
Phreatobacter stygius
Pathway
pstg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pstg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
E8M01_19170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pstg03400
]
E8M01_19170
Enzymes [BR:
pstg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
E8M01_19170
DNA repair and recombination proteins [BR:
pstg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
E8M01_19170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
Zn_ribbon_PriA
Helicase_C
AAA_30
zf_Rg
Zn_ribbon_6
AAA_16
PIF1
ADDB_N
Motif
Other DBs
NCBI-ProteinID:
QCI66144
UniProt:
A0A4D7AX12
LinkDB
All DBs
Position
4081542..4083719
Genome browser
AA seq
725 aa
AA seq
DB search
MSAPRYADVLIPVAVDRPYSYRIPADLAVGPGDLVAVPLGNRTAVGAVWRLRDEPGGVSH
NRLKDIAARHDVPPVPHEIRRLVDWIADYTLAPRGMVLRMAMRDPDALAPPRPRIGVRAT
GQPASRPTPSRAKVLALMADGLARGKSEAAREAGVSVGVIDGLVDDGALEAITLAPEAVA
LPLDPAYAVASLNTAQKDAALAIEDAVAAGGFQVFLLDGVTGSGKTEVYFEAVAEALRQD
KQTLILVPEIALTTQFLDRFAQRFGHRPAAWHSGIGATRRARVWTGVAAGEVKVVIGARS
ALFLPFKALGLVVVDEEHEQAYKQDDGVHYHARDMAVVRARLHDAPVVLASATPSVESRV
NADKGRYRRLILPERFGGREMPKIATVDLKTRGAPHGRWISPALELAVRDTLAAKEQSLL
FLNRRGYAPLTLCRACGERVQCPNCTAWLVDHRFRRRLVCHHCGFSMPPLEHCPKCEAVD
SFVACGPGVERLAEECATLFPEARLLVLSSDMAGGIERIRQEIEAVAKGEADIVIGTQLV
AKGHNFPHLALVGVIDADLGLSNGDPRAGERTFQLLQQVVGRAGRAKDGSRALIQTHQPA
HPIIDAIVKGDREAFYAAEIAMREEAQLPPYGRLAALVVSAEAQADAFGYARTIMRAAPV
GTDVRLLGPAEAPLALVRGRHRVRLLARSARAFDMSGWLRAWLSSVEAPRGNVRLEIDVD
PQSFL
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcgccgcgctatgccgatgtcctgattcccgtcgccgtcgatcgcccctacagc
taccgcatccccgcggatcttgcagtcgggcccggcgatctcgtggccgtgccgctcggc
aaccgcacggcggtcggcgcggtctggcgtctgcgcgacgagcccggcggggtatcgcac
aaccggctgaaggacatcgcggcccgccatgacgttccgccggtgccgcatgagatccgt
cgcctggtcgactggatcgccgactatacgctcgcgccgcgcggcatggtgctgcgcatg
gcgatgcgcgatcccgacgcccttgcgccgccccggccgcgcatcggcgtgcgcgccacc
ggccagccggcgagccggccgacgccgtcgcgcgccaaggtcctggccctgatggccgat
gggctggcgcggggcaaaagcgaggcggcgcgcgaggccggcgtctcggtcggcgtcatc
gatggcctggtcgacgacggcgcgctggaagcgatcacgctcgcccccgaggctgtcgcc
ctgccgctcgatccggcctatgcggtggccagcctcaacaccgcccagaaagacgcggcg
ctggccatcgaggacgccgtggcggccggcggtttccaggtcttcctgctcgacggcgtc
accggctcgggcaagaccgaggtctatttcgaggcggtggccgaggcgctcaggcaggac
aagcagacgctcatcctggtgccggaaatcgcgctcaccacccagtttctcgaccgtttc
gcccagcgcttcggccaccggccggcggcctggcattccggtatcggtgcgaccaggcgc
gcccgggtctggaccggggtcgcggccggcgaggtcaaggtggtcatcggcgcgcgctcg
gcgctgttcctgccgttcaaggcgcttggcctggtcgtcgtcgatgaggaacacgagcag
gcctacaagcaggatgacggcgtccactaccatgcccgcgacatggcggtggtgcgtgcc
cgcttgcacgatgcgccggtggtgctcgcctcggcaacgccttcggtcgaatccagggtc
aatgccgacaagggtcgctatcggcggctgatcctgcccgaacgtttcggcgggcgcgaa
atgcccaagatcgcgaccgtcgacctgaagaccagaggtgcgccgcatggacgctggatc
tcgccggcgctcgagctggcggtccgcgacacccttgccgccaaggaacagtcgcttctc
ttcctcaaccggcgcggctatgcgccgctgacgctttgccgggcctgcggcgagcgtgtg
caatgcccgaactgcaccgcctggctggtcgaccatcgcttccgccggcggctggtctgc
caccattgcggtttctccatgccgccgctggagcattgccccaaatgcgaggcggtcgac
agttttgttgcctgcgggcccggcgtcgaacggctggcggaagaatgcgccacgctgttc
ccggaagcccgccttctggtgctctcctccgacatggccggcggcatcgagcggatccgc
caggagatcgaggccgtcgccaagggcgaggccgacatcgtcatcggcacgcaactggtc
gccaagggccacaatttcccgcatctggctttggtcggcgtcatcgatgccgatcttggc
ctgtccaatggcgacccgcgggccggcgagcggacgttccaactgttgcagcaggtggtc
ggccgggccggccgggccaaggacggttcgcgcgcgctgatccagacccaccagccggcc
catccgatcatcgacgccatcgtcaagggcgaccgcgaggccttctacgccgccgagatc
gccatgcgcgaagaggcgcaactgccgccctatggccggctggcggcgctggtcgtctcg
gccgaggcccaggccgacgccttcggttatgcccgcaccatcatgcgggcggcgcctgtc
ggcacggatgtacggctcctgggcccggccgaggcgcctctcgccctggtgcgtggtcgc
caccgcgtccgcctgctggcgcgttcagcacgggccttcgacatgtccggctggctgcgc
gcctggctctcctcggtcgaggcgccgcgcggcaatgtccggctcgaaatcgatgtcgac
ccgcagagcttcttgtag
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