Phreatobacter stygius: E8M01_21930
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Entry
E8M01_21930 CDS
T05955
Symbol
ihfB
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
pstg
Phreatobacter stygius
Brite
KEGG Orthology (KO) [BR:
pstg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pstg03032
]
E8M01_21930 (ihfB)
03036 Chromosome and associated proteins [BR:
pstg03036
]
E8M01_21930 (ihfB)
03400 DNA repair and recombination proteins [BR:
pstg03400
]
E8M01_21930 (ihfB)
DNA replication proteins [BR:
pstg03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
E8M01_21930 (ihfB)
Chromosome and associated proteins [BR:
pstg03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
E8M01_21930 (ihfB)
DNA repair and recombination proteins [BR:
pstg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
E8M01_21930 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-DNA_bdg
HU-CCDC81_euk_1
HU-CCDC81_bac_2
XPC-binding
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
QCI66657
UniProt:
A0A4D7BFK6
LinkDB
All DBs
Position
complement(4665889..4666170)
Genome browser
AA seq
93 aa
AA seq
DB search
MIKSELVQKIAEQNPQLYQRDVENIVNAILDEIVSALARGDRVELRGFGAFSVKARGARV
GRNPRTGAHVAVEDKVVPFFKTGKEMRERLNRV
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaatccgaactggtccaaaagatcgccgagcagaacccgcagctctatcagcgc
gacgtcgagaatatcgtcaatgcgatcctcgacgagatcgtctcggcgctggcgcgcggc
gaccgggtggagctgcgcggcttcggtgcgttttctgtaaaggcgcgcggcgcccgcgtc
ggccgcaacccgcgcaccggcgcccatgtcgcggtggaggacaaggttgtgcccttcttc
aagacgggcaaggaaatgcgcgagcggctgaaccgggtctga
DBGET
integrated database retrieval system
