Phreatobacter stygius: E8M01_22540
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Entry
E8M01_22540 CDS
T05955
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
pstg
Phreatobacter stygius
Pathway
pstg02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pstg00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
E8M01_22540
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pstg02000
]
E8M01_22540
Transporters [BR:
pstg02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
E8M01_22540
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
QCI66774
UniProt:
A0A4D7AZ86
LinkDB
All DBs
Position
complement(4797113..4798702)
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AA seq
529 aa
AA seq
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MNRREFAKLMAAAGVAGGTEISWGLSRAVGQTRGGTLNTIIQPEPPILVTAINQQQPTLT
LGGKIYESLLRYGFDLKPMPGLAQSWEVSPDGLKYTFKLFPNITFHDGKPMTSADVVFSV
MTVLLETHPRARGTFQRIDKAEAPDPLTVVFTLKQPFAPFLSSFDCTTAPIVPKHIYEGT
DIRKNPANAQAIGTGPFKLKEWVRGSHIHLVRHEGYYRQGEPFLDEIYYRVIPDAASRSV
ALEKGIVQLTQWTDVEFFDVARLQKLPNLEMTTKGYEFFAPHLWLDMNNRVAPMNDKRFR
QACSHAIDRTAMKQRVFFGLGKEATGPVSSKTPFYEKNVKQYDYSLDKAKALLDDMGLKP
GAGGKRVTINFLVPPYGEIWQRMGEFIRQSLGRVGIDIVLQGLDLAGWAERVSNWEYEMT
VNLLYQLGDPALGVSRSYVSSNIRKGVLFSNMAGYSNPEVDRLFEEAAVATDEAKRRELY
SQVQKIVVEDCPLAWLIEQDFPNFVDKRLKNVVTSGIGVHDTFGRVSLG
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgaacagacgcgaattcgccaagctcatggccgccgcaggtgttgccggcggtaccgag
atttcctgggggctcagccgcgcggtcggccagacccgtggcggcacgctcaacaccatc
atccagccggaaccgccgatcctggtcaccgcgatcaaccagcagcagccgacgctcacc
ctcggcggcaaaatctatgagagcctgctgcgctacggcttcgacctgaagccgatgccc
ggcctcgcccagtcctgggaggtgtcgccggacggcctgaaatataccttcaagctgttc
cccaatatcaccttccacgacggcaagccgatgacctcggccgacgtggtgttctcggtc
atgaccgtgctgctcgagacccacccgcgcgcccgcggcaccttccagcgcatcgacaag
gccgaagcgcccgatccgctgacggtggtgttcacgctgaagcagcccttcgcgccgttc
ctcagctcgttcgactgcaccactgcgccgatcgtgccgaagcacatctacgagggcacc
gatatccgcaagaacccggccaatgcccaggcgatcggcaccggcccgttcaagctgaag
gaatgggtacgcggctcgcatatccatctcgtccggcacgagggctattaccgccagggc
gagccttttctcgacgagatctattaccgggtcattccggatgccgcctcgcgctcggtg
gcgctggagaagggcatcgtccagctcacccagtggaccgatgtcgagttcttcgacgtg
gcgcgcctgcagaagctgcccaacctggagatgaccaccaagggctacgaattcttcgcc
ccgcatctctggctcgacatgaacaaccgcgtcgcgccgatgaacgacaagcgcttccgc
caggcctgttcgcatgccatcgaccgcaccgcgatgaagcagcgggtgttcttcggcctc
ggcaaggaagcgaccgggccggtctcctccaagaccccgttctacgaaaagaacgtcaag
caatatgactactcgctcgacaaggccaaggccctgctcgacgacatgggcctcaagccc
ggggctggcggaaaacgcgtcaccatcaacttcctggtgccgccttatggcgagatctgg
cagcgcatgggcgagttcatccgccagtcgctcggccgggtcggtatcgacatcgtgctg
cagggcctcgacctcgccggctgggccgaacgggtgtcgaactgggaatatgagatgacc
gtcaacctgctttaccagctcggcgatccggcgctcggcgtgtcacgcagctatgtctcg
tccaacatccggaaaggcgtgctgttctccaacatggcgggctattccaatccggaagtc
gaccggctgttcgaggaggcggcggtcgccaccgacgaagccaagcgccgggagctctat
tcccaggtccagaagatcgtcgtcgaggactgcccgctggcctggctgatcgagcaggac
ttcccgaacttcgtcgacaagcgcctgaaaaacgtcgtgacatccggcatcggcgttcac
gacaccttcggccgggtgtcgctcggatga
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