Phreatobacter stygius: E8M01_26525
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Entry
E8M01_26525 CDS
T05955
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pstg
Phreatobacter stygius
Pathway
pstg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pstg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E8M01_26525 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pstg03019
]
E8M01_26525 (groL)
03110 Chaperones and folding catalysts [BR:
pstg03110
]
E8M01_26525 (groL)
03029 Mitochondrial biogenesis [BR:
pstg03029
]
E8M01_26525 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pstg04147
]
E8M01_26525 (groL)
Enzymes [BR:
pstg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
E8M01_26525 (groL)
Messenger RNA biogenesis [BR:
pstg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
E8M01_26525 (groL)
Chaperones and folding catalysts [BR:
pstg03110
]
Heat shock proteins
HSP60 / Chaperonin
E8M01_26525 (groL)
Mitochondrial biogenesis [BR:
pstg03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
E8M01_26525 (groL)
Exosome [BR:
pstg04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
E8M01_26525 (groL)
Exosomal proteins of other body fluids (saliva and urine)
E8M01_26525 (groL)
Exosomal proteins of breast cancer cells
E8M01_26525 (groL)
Exosomal proteins of colorectal cancer cells
E8M01_26525 (groL)
Exosomal proteins of bladder cancer cells
E8M01_26525 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
QCI69444
UniProt:
A0A4D7B8A1
LinkDB
All DBs
Position
5603352..5604992
Genome browser
AA seq
546 aa
AA seq
DB search
MAAKELKFSTEAREKMLRGVDILAEAVKITLGPKGRNVVIEKSFGAPRITKDGVTVAKEI
ELSDRFENMGAQMVREVASKTSDTAGDGTTTATVLAQTIVREGAKSVAAGMNPMDLKRGI
DLAVAAVVADLKRHARKIKSNDEIAQVGTISANGDTEIGRFLADAMQKVGNEGVITVEEA
RSLTTELEVVEGMAFDRGYVSPYFVTNAEKMRVELEDAYILIHEQKLSGLQALLPLLEAV
VQSGKPLLIVAEDVEGEVLATLVVNKLRAGLRVVAVKAPGFGDRRKAMLEDIAILTGGTA
VSEDLGIKLDNVTLAMLGRAKKVVVEKDSTTLVGGAGARKDIDARIAQIRLQIEETTSSY
DKEKLQERLAKLAGGVAVIRVGGSTEVEVKERKDRVDDALHATRAAVEEGILPGGGVALL
RALKALDPVKPGNDDQKTGIDIVRRALQAPARQIAENAGEDGSVIIGKLMEKKDYNWGFN
AATGVYQDLVAAGVIDPAKVVRTALQDAASVASLMITTEALIAELPKPQKAGAGAGPGGG
MGDMDF
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggccgccaaggaactgaaattctcgacggaagcgcgcgagaagatgctgcgcggtgtc
gatattctcgccgaagccgtgaagatcacgctcgggccgaagggccgcaacgtggtgatc
gagaagtcgttcggggcgccgcgcatcaccaaggatggcgtcaccgttgccaaggagatc
gagctttccgacaggttcgagaacatgggcgcgcagatggtgcgcgaggtggcctcgaag
accagcgataccgccggcgacggcaccaccaccgccaccgtgctggcccagacgatcgtg
cgcgaaggcgccaaatcggtggccgccggcatgaacccgatggacctgaagcgtggcatc
gacctggccgtcgccgcggtggtcgcggatctcaagcgccatgcccgcaagatcaagtcc
aatgacgagatcgcccaggtcggcaccatctcggccaatggcgataccgagatcggccgt
ttcctggcggatgccatgcaaaaggtcggcaatgagggcgtcatcacggtggaggaggcc
aggagcctgaccaccgaactcgaagtggtcgaaggcatggcgttcgaccgcggctatgtc
tcgccctatttcgtcaccaatgccgagaagatgcgggtcgagctcgaggatgcctatatc
ctgatccatgagcagaagctttccgggctgcaggcgctgctgccgctgctcgaagccgtc
gtccagtcgggcaagccgctgctgatcgtcgccgaggatgtcgagggcgaggtgctggca
acgctggtggtcaacaagctcagggcgggtctgcgcgtcgtcgcggtcaaggcgccgggt
ttcggcgatcgccgcaaggcgatgctggaggatatcgcgatcctcaccggcggcaccgcg
gtgagcgaggatctcggcatcaagctggacaatgtcacgctggccatgctcggccgggcc
aagaaggtggtggtggaaaaggattcgaccacgcttgtcggcggcgccggcgcgcgcaag
gacatcgacgcgcgcattgcccagatccgcctgcagatcgaggagacgacctccagctac
gacaaggaaaagctgcaggagcggctggccaagctggccggcggcgtcgcggtgatccgg
gtcggcggttccaccgaggtcgaggtgaaggaacgtaaggaccgggtcgatgacgcgctg
catgcgacgcgcgcggcggtcgaggagggcatcctgcccggtggcggcgtggcgctgtta
cgcgcgctcaaggcgctcgatccggtcaagccgggcaatgacgaccagaagaccggtatc
gacatcgtgcgccgcgcgctgcaggcgccggcccggcagattgccgagaatgccggcgag
gacggctcggtcattatcggcaagctgatggaaaagaaggattacaactggggtttcaat
gctgcgaccggcgtctatcaggacctggtggcggccggcgtgatcgatccggccaaggtg
gtgcggactgcgctgcaggacgcggcgtcggtcgcgtcgctgatgatcaccaccgaggcc
ttgatcgccgaactgccgaagccgcagaaggccggcgccggtgcaggtccgggcggtggc
atgggagacatggacttctga
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