Phreatobacter stygius: E8M01_28235
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Entry
E8M01_28235 CDS
T05955
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pstg
Phreatobacter stygius
Pathway
pstg03420
Nucleotide excision repair
pstg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pstg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
E8M01_28235
03430 Mismatch repair
E8M01_28235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pstg03400
]
E8M01_28235
Enzymes [BR:
pstg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
E8M01_28235
DNA repair and recombination proteins [BR:
pstg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
E8M01_28235
MMR (mismatch excision repair)
Other MMR factors
E8M01_28235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
ResIII
DUF3261
AAA_12
Motif
Other DBs
NCBI-ProteinID:
QCI67771
UniProt:
A0A4D7B4B3
LinkDB
All DBs
Position
5991158..5993233
Genome browser
AA seq
691 aa
AA seq
DB search
MSVAAAYLTKLNPEQRRAVEHGAASTEAGCGPLLVIAGAGSGKTNTLAHRVAHLIVGGAD
PRRIMLLTFSRRAAAEMTRRVERIAAEALGAKAGVMTDALTWAGTFHGIGARILRDHAGE
IGLDPGFTIHDREDSADLVNLCRHELGFSKTETRFPTKGTCLAIYSRAVNAEMALEEVLR
AAFPWCMAWTAELRALFAAYVEAKQRHNVLDYDDLLLYWAQMVAEPALAAELSGRFDHIL
VDEYQDTNRLQSSILIALKPAGRGLTVVGDDAQSIYAFRAATVRNILDFPGQFDPPAEIV
TLDRNYRSTQPILAAANAVIGEAAERFTKNLWTERTSGEPPGLVTVRDEIDQARYVADRI
LENRETGTALKAQAVLFRTSHHSGPLEVELVRRNIPFVKFGGLKFLDAAHVKDMLALLRF
VQNPRDRVAGFRVLQLIPGVGGSSAARLIDQMTGVRDPFGALAEAAAPPRSGDDWPAFVD
LALALRSGRAGWPAEFGAARLWYEPHLERMHEDASVRRADLLQLEQIAGGYPSRERFLTE
LTLDPPDATSDQAGMPLLDEDYLILSTIHSAKGQEWKSVFVLNAVDGCIPSDLGAGTSSE
IEEERRLLYVAMTRAKDDLHLMVPQRFFTHQQSSTGDRHVYAQRTRFIPPSVLKNFQLTT
WPIAAQQANAGRAAAQPVKVDIAQRMRGMWR
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
ttgtccgtcgccgccgcctatctgaccaagctcaaccccgagcagcggcgcgcggtcgag
cacggcgcggcctcaacggaggccggctgcggaccgctgctggtgatcgcgggggcgggt
tcgggcaagaccaatacgctggcccatcgggtcgcccacctgatcgtcggcggcgccgat
ccgcgccgcatcatgctgctgaccttttcgcgccgggcggctgccgaaatgacccgaagg
gtcgagcgcatcgcggccgaggcgctgggtgccaaggccggcgtgatgaccgatgccctg
acctgggccggcactttccacggcatcggcgcgcgcatcctgcgtgaccatgccggcgag
atcggactggatccgggcttcaccattcatgatcgcgaggattccgccgatctcgtcaac
ctctgccgccacgagctgggtttctccaagaccgagacgcggtttccgaccaagggcacc
tgccttgcgatctattcgcgcgcggtcaatgccgagatggcgctggaggaggtgctgcgg
gcggcttttccctggtgcatggcctggacagcggaactgcgggcgctgtttgccgcctat
gtcgaggcgaaacagcgccacaacgtgctcgattacgacgacctgttgctctactgggcg
caaatggtcgccgagccggcgctcgccgcggagctttccggccgcttcgaccatatcctg
gtcgacgaatatcaggacaccaaccggctgcagtcgtcgatcctcatcgccttgaagccc
gcggggcgcggcctcaccgtggtcggcgacgacgcccagtcgatctatgcgttccgcgcc
gcgaccgtgcgcaacatcctcgattttcccggccagttcgacccgccggccgagatcgtc
acgctcgaccgcaactaccgctcgacccagccgatcctggccgccgccaatgcggtgatc
ggcgaggccgccgagcgcttcaccaagaatctgtggaccgaacgcacctccggcgagcct
ccgggcctcgtcaccgtgcgcgacgagatcgaccaggcccgctacgtcgccgaccggatc
ctggaaaaccgcgagaccggcacggccttgaaggcccaggcggtgctgttccgcacctcg
catcacagcggcccgctggaggtcgagctggtccggcgcaacattcctttcgtcaagttc
ggcgggctcaagttcctcgatgccgcccatgtcaaggacatgctggcattgctgcgcttc
gtgcagaacccgcgcgaccgcgtcgccgggttccgggtgctgcagctcatcccgggcgtt
ggcggcagttcggcggcacgcctgatcgaccagatgaccggggtcagggatccgttcggc
gcgctggccgaggccgcggcgccgcctcgctccggcgatgactggccggcctttgtcgac
ctggccttggccttgcggtccggccgggccggttggccggccgagttcggcgcggcgcgg
ctctggtacgaaccgcatctggagcgcatgcacgaggacgccagcgtgcggcgcgccgat
cttctgcaactggagcagatcgccggcggttatccctcgcgcgagcgcttcctgaccgag
ctgaccctggatccgcccgacgcgaccagcgaccaggccggcatgcccttgctcgacgag
gactacctgatcctgtcgaccattcattccgccaagggccaggaatggaaatcggtcttc
gtgctcaatgcggtcgatggttgcattccctccgatctcggtgccggcaccagttccgag
atcgaggaggagcggcggctgctctatgtcgcgatgacccgcgccaaggacgacctgcac
ctgatggtgccgcagcgcttcttcacccatcagcagtcatccaccggcgaccggcacgtc
tatgcccagcgcacccggttcattccgccctcggttctgaaaaacttccagctgaccacc
tggccgatcgccgcccagcaggccaatgccggccgcgccgccgcccagccggtcaaggtg
gatatcgcccagcgcatgcgcggcatgtggcgctaa
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