KEGG   Phreatobacter stygius: E8M01_30745
Entry
E8M01_30745       CDS       T05955                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
pstg  Phreatobacter stygius
Pathway
pstg00010  Glycolysis / Gluconeogenesis
pstg00020  Citrate cycle (TCA cycle)
pstg00260  Glycine, serine and threonine metabolism
pstg00280  Valine, leucine and isoleucine degradation
pstg00310  Lysine degradation
pstg00380  Tryptophan metabolism
pstg00620  Pyruvate metabolism
pstg00630  Glyoxylate and dicarboxylate metabolism
pstg00640  Propanoate metabolism
pstg00670  One carbon pool by folate
pstg00785  Lipoic acid metabolism
pstg01100  Metabolic pathways
pstg01110  Biosynthesis of secondary metabolites
pstg01120  Microbial metabolism in diverse environments
pstg01200  Carbon metabolism
pstg01210  2-Oxocarboxylic acid metabolism
pstg01240  Biosynthesis of cofactors
Module
pstg_M00009  Citrate cycle (TCA cycle, Krebs cycle)
pstg_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pstg_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
pstg_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:pstg00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    E8M01_30745 (lpdA)
   00020 Citrate cycle (TCA cycle)
    E8M01_30745 (lpdA)
   00620 Pyruvate metabolism
    E8M01_30745 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    E8M01_30745 (lpdA)
   00640 Propanoate metabolism
    E8M01_30745 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    E8M01_30745 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    E8M01_30745 (lpdA)
   00310 Lysine degradation
    E8M01_30745 (lpdA)
   00380 Tryptophan metabolism
    E8M01_30745 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    E8M01_30745 (lpdA)
   00670 One carbon pool by folate
    E8M01_30745 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pstg04147]
    E8M01_30745 (lpdA)
Enzymes [BR:pstg01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     E8M01_30745 (lpdA)
Exosome [BR:pstg04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   E8M01_30745 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_oxidored FAD_binding_2 NAD_binding_8 HI0933_like GIDA FAD_binding_3 AlaDh_PNT_C DAO Lys_Orn_oxgnase Thi4 2-Hacid_dh_C XdhC_C 3HCDH_N Amino_oxidase Trp_halogenase
Other DBs
NCBI-ProteinID: QCI68221
UniProt: A0A4D7B5E0
LinkDB
Position
6483088..6484527
AA seq 479 aa
MSTYDIIVIGGGPGGYVAAIRAAQLGLKTAVVEREHLGGICLNWGCIPTKALLRSAEIFH
YANHAKDYGLTLNGTMTFDPAAVVKRSRGVSGQLNNGVGFLLKKNKVDVIWGEAKITGVG
KVTVSAPAKPAVQPQTPPPKGILPAGTYQAKNIIVATGARPRVLPGIEPDGKLIWTYFDA
MVPATFPKSLVVMGSGAIGIEFASFYRTMGAEVTVVEVLPQLLPVEDAEIAALARKRFEK
QGIKILTSTKVTKVDKSANGITATIEDDKGKTQTLVAERLISAVGVVGNIENLGLEALGV
KIDRGTVVTDGYGRTNVPGIFAIGDVAGPPMLAHKAEHEGVICVETIKGLTTHAMDKAKI
PGCTYCHPQIASVGLTEAKAKEAGYTLKVGRFPFVGNGKAIALGEPDGMVKTIFDAKTGK
LLGAHMVGAEVTELIQGYVVAMNLETTEEELMHTVFPHPTLSEMMHESVLDAYGRVIHT
NT seq 1440 nt   +upstreamnt  +downstreamnt
atgtccacttacgacatcatcgtcatcggcggcggcccaggcggctatgtcgcggcgatc
cgcgcggcccagctcggcttgaagactgcggtcgtcgaacgcgaacatctcggcggcatc
tgcctcaactggggctgcattccgaccaaggcgctgctgcgctcggccgagattttccac
tacgccaatcacgccaaggattatggcctgacgctgaacggcaccatgacctttgatccg
gccgccgtggtcaagcgctcgcgcggcgtctccggccagctcaacaacggcgtcggcttc
ctgctgaagaagaacaaggtcgacgtcatctggggcgaggccaagatcaccggggtcggc
aaggtgacggtctccgcgccggcgaaacccgccgtccaaccgcagacgccgccgcccaag
ggcatcctgccggccggcacctatcaggccaagaacatcatcgtcgccaccggcgcgcgg
ccgcgcgtgctgcccggcatcgaacccgacggcaagctgatctggacctatttcgacgcc
atggtgccggcgaccttcccgaagagcctggtggtcatggggtcgggcgccatcggcatc
gaattcgcctcgttctaccgcaccatgggcgccgaggtgacggtggtcgaggtgctgccc
cagctgctgccggtcgaggatgccgagatcgccgcgctcgcccgcaagcgcttcgagaag
cagggcatcaagatcctgacctcgaccaaggtgaccaaggtcgacaaatcggccaacggc
atcaccgcgacgatcgaggacgacaagggcaagacgcagacgcttgtcgccgagcggctg
atctcggcggtcggggtggtcggcaatatcgaaaatctcgggctcgaggcgctcggcgtg
aagatcgaccgcggcacggtggtcaccgatggctatggccggaccaatgtccccggcatc
ttcgccattggcgacgtcgccggcccgccgatgctcgcccacaaggcggagcacgagggc
gtcatctgcgtcgagaccatcaagggcctcaccacccatgccatggacaaggccaagatc
cccggctgcacctattgccacccgcagatcgcttccgtcggcctgaccgaagccaaggcc
aaggaggccggctacacgctgaaggtcggccgcttcccgtttgtcggcaatggcaaggcg
atcgcgctgggcgagcccgatggcatggtcaagacgatcttcgacgccaagaccggcaaa
ctgctcggcgcgcatatggtcggcgcggaggtcaccgaactgatccagggttatgtcgtg
gcgatgaacctggagacgacggaagaagagctcatgcacacggtcttcccgcatccgacc
ctgtcggaaatgatgcatgagagcgtgctcgacgcctatggccgggtgattcacacctga

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