Phreatobacter stygius: E8M01_32265
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Entry
E8M01_32265 CDS
T05955
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pstg
Phreatobacter stygius
Brite
KEGG Orthology (KO) [BR:
pstg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pstg03032
]
E8M01_32265
03400 DNA repair and recombination proteins [BR:
pstg03400
]
E8M01_32265
Enzymes [BR:
pstg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
E8M01_32265
DNA replication proteins [BR:
pstg03032
]
Prokaryotic type
DNA Topoisomerases
E8M01_32265
DNA repair and recombination proteins [BR:
pstg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
E8M01_32265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Top1B_N_bact
Topoisom_I
DUF905
Motif
Other DBs
NCBI-ProteinID:
QCI68492
UniProt:
A0A4D7BL80
LinkDB
All DBs
Position
complement(6835737..6836855)
Genome browser
AA seq
372 aa
AA seq
DB search
MTDERDRPDVSAKSRAGRLTTAGRQGLTIRRLRSGRGFSYRDETGEHITKATILARIRSL
AVPPAYEDVRISSDPNAHLQAVGRDEAGRLQYRYHRDWEVVREARKARRLAGVADALPRL
RAAMRRDLALPGVGRRMVLALAVALIDRTSIRVGGDAYARANGGRGAATLLKRDVRLTGG
GIRLNFRGKGGKTVECDIEDAALARTLSAVMRLPGRRMLQYRAEDGTVHRIGAADINAYL
RDATGVAISAKDLRMLAGSVLAAEILVKVEPAPQERAKRRQLAEVMRVVSERLGNTPAVA
RKSYVHVVLVDAFMAGALKRLYRATEPRRNMRRVEQMLHRLAGRARSRRQSRVAAAVLPI
IQGGSNGSRPAP
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatgagcgcgatcgtccagacgtgtccgccaagagccgggcggggcggctgacc
accgccggacgccagggcctgaccatcaggcgcctgcggtcggggcgcggcttcagctat
cgcgacgagaccggcgagcacatcaccaaggcaacgatcctcgcccgcatccggtcgctc
gccgtgcctccggcctatgaggacgtcaggatttcgtccgatccgaacgcgcatctccag
gcggtcggccgcgacgaagcgggccgcctgcaatatcgctatcaccgggattgggaggtg
gttcgtgaggcgcgcaaggccaggcggctggcgggggtcgccgatgccctgccgcggctg
cgcgccgccatgcgccgcgacctcgcccttccaggcgtcggccgacgcatggtgctggcc
ctggcggtggccttgatcgaccgtacctctatccgggtcggcggcgacgcctatgcgcgc
gccaatggcgggcgaggggccgcgaccttgctgaaacgcgacgtcagactgacaggcggc
gggatccggctgaatttccgtggcaagggcggcaagacggttgaatgcgacatcgaagac
gcggcgctggccaggaccttgtccgccgtgatgcggctgcccggccgccgcatgctgcaa
tatcgggccgaggacggcacggtgcacaggatcggcgcggccgatatcaacgcctatttg
cgcgacgcgaccggcgtcgcgatcagcgccaaggacctgcgcatgctcgccggcagcgtc
ctggccgcggaaatcctggtcaaggtcgagccggcaccgcaggagcgcgccaagcggcgt
cagctcgccgaggtcatgcgcgtggtgtccgagcgcctgggcaatacgccggcggtggcg
cgcaagagttatgtgcatgtcgtgctggtcgacgccttcatggccggcgcgctgaagcgg
ctttaccgggccaccgaaccgcgccgcaacatgcgacgcgtcgagcagatgttgcaccgg
cttgccgggcgggcgcgaagccgccgccagtcgcgggtggccgccgccgtcttgccgatc
atccagggcggttccaatggctcccgaccagcaccttga
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