KEGG   Phreatobacter stygius: E8M01_32300
Entry
E8M01_32300       CDS       T05955                                 
Name
(GenBank) Ku protein
  KO
K10979  DNA end-binding protein Ku
Organism
pstg  Phreatobacter stygius
Pathway
pstg03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:pstg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    E8M01_32300
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pstg03400]
    E8M01_32300
DNA repair and recombination proteins [BR:pstg03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     E8M01_32300
SSDB
Motif
Pfam: Ku
Other DBs
NCBI-ProteinID: QCI68499
UniProt: A0A4D7B3X8
LinkDB
Position
6840191..6841117
AA seq 308 aa
MPLPRANWKGHLKIGELNCAVALFSAALASERIAFHILNRKTGNRIRREFIDPATGKPVD
RDDQVKGYEVSPDDYVVLEPDEVASVVPDSDKTLAIKSFIPCDQVDTVYFDKPYYLAPAN
AMADDAFAVLRDGMATGKVVALARAILFRRVRTLLIRPEGTGLIAHTLKFDYEIRPAKEA
FDDIPELKIKGEMLDLAKHIITTKKGHFDPATFEDRYEAAVADLVRAKMEGRPAKRRRAP
AEAKVVDLMEALRASAGAKAPARRATAAGGRATAAKPKATSKPKTTAKPKTTAKPNTKMP
RSRVKKAG
NT seq 927 nt   +upstreamnt  +downstreamnt
atgcccttgcccagagccaactggaaaggccatctgaagatcggcgagctgaactgcgcc
gtggccctgttctccgccgccttggcctcggagcggatcgccttccacatcctcaatcgc
aagaccggcaaccgcatccgccgggaattcatcgatccggcgaccggcaagccggtcgat
cgcgatgatcaggtcaagggttacgaggtctcgcccgacgactatgtcgttctggagccg
gacgaagtggcgagcgtcgtgccggacagcgacaagacgctggcgatcaaatccttcatt
ccttgcgaccaggtcgacaccgtctatttcgacaagccttattatctcgctccagcgaac
gcgatggcggatgacgcctttgcggtgctgcgcgacggcatggcgaccggcaaggtcgtg
gcgcttgcccgggccatcctgttccggcgcgtgcggacgctgctgatccggccggagggt
accggcctgatcgcccatacactgaaattcgactatgagatccggccggcgaaagaggcc
ttcgacgacatccccgagttgaagatcaagggcgagatgctcgatctcgccaaacacatc
atcacgaccaagaagggccacttcgacccggcaaccttcgaagaccgctacgaggcggcg
gtcgccgacctggtgcgcgcgaagatggagggccgtccggccaagcgccgtcgcgcacca
gccgaggccaaggtcgtcgacctcatggaagcgctgcgcgccagcgccggggccaaggcg
ccggcccgccgcgcgacagccgccggtggccgagccacggcggccaaacccaaggcgacg
tccaagcccaagacaacagccaaacccaagacaacagccaaacccaacacaaagatgccg
cggagccgagtcaaaaaagccggctaa

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