Phreatobacter stygius: E8M01_32300
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Entry
E8M01_32300 CDS
T05955
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
pstg
Phreatobacter stygius
Pathway
pstg03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pstg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
E8M01_32300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pstg03400
]
E8M01_32300
DNA repair and recombination proteins [BR:
pstg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
E8M01_32300
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
QCI68499
UniProt:
A0A4D7B3X8
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All DBs
Position
6840191..6841117
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AA seq
308 aa
AA seq
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MPLPRANWKGHLKIGELNCAVALFSAALASERIAFHILNRKTGNRIRREFIDPATGKPVD
RDDQVKGYEVSPDDYVVLEPDEVASVVPDSDKTLAIKSFIPCDQVDTVYFDKPYYLAPAN
AMADDAFAVLRDGMATGKVVALARAILFRRVRTLLIRPEGTGLIAHTLKFDYEIRPAKEA
FDDIPELKIKGEMLDLAKHIITTKKGHFDPATFEDRYEAAVADLVRAKMEGRPAKRRRAP
AEAKVVDLMEALRASAGAKAPARRATAAGGRATAAKPKATSKPKTTAKPKTTAKPNTKMP
RSRVKKAG
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgcccttgcccagagccaactggaaaggccatctgaagatcggcgagctgaactgcgcc
gtggccctgttctccgccgccttggcctcggagcggatcgccttccacatcctcaatcgc
aagaccggcaaccgcatccgccgggaattcatcgatccggcgaccggcaagccggtcgat
cgcgatgatcaggtcaagggttacgaggtctcgcccgacgactatgtcgttctggagccg
gacgaagtggcgagcgtcgtgccggacagcgacaagacgctggcgatcaaatccttcatt
ccttgcgaccaggtcgacaccgtctatttcgacaagccttattatctcgctccagcgaac
gcgatggcggatgacgcctttgcggtgctgcgcgacggcatggcgaccggcaaggtcgtg
gcgcttgcccgggccatcctgttccggcgcgtgcggacgctgctgatccggccggagggt
accggcctgatcgcccatacactgaaattcgactatgagatccggccggcgaaagaggcc
ttcgacgacatccccgagttgaagatcaagggcgagatgctcgatctcgccaaacacatc
atcacgaccaagaagggccacttcgacccggcaaccttcgaagaccgctacgaggcggcg
gtcgccgacctggtgcgcgcgaagatggagggccgtccggccaagcgccgtcgcgcacca
gccgaggccaaggtcgtcgacctcatggaagcgctgcgcgccagcgccggggccaaggcg
ccggcccgccgcgcgacagccgccggtggccgagccacggcggccaaacccaaggcgacg
tccaagcccaagacaacagccaaacccaagacaacagccaaacccaacacaaagatgccg
cggagccgagtcaaaaaagccggctaa
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