Phreatobacter stygius: E8M01_32575
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Entry
E8M01_32575 CDS
T05955
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
pstg
Phreatobacter stygius
Pathway
pstg03410
Base excision repair
pstg03430
Mismatch repair
pstg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pstg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
E8M01_32575 (recJ)
03430 Mismatch repair
E8M01_32575 (recJ)
03440 Homologous recombination
E8M01_32575 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pstg03400
]
E8M01_32575 (recJ)
DNA repair and recombination proteins [BR:
pstg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
E8M01_32575 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
E8M01_32575 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
E8M01_32575 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
QCI68552
UniProt:
A0A4D7BLF1
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All DBs
Position
complement(6894576..6896378)
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AA seq
600 aa
AA seq
DB search
MINPRRLFLGVEQSVLGRAWRDRLDDPARAQALAIAQVHDLPDILSRVLAGRGVIADGVE
AYLEPTVKAAMPDPSVLTDMDRAVERLVHAVVTTERVAIFGDYDVDGATSSAVLALFLRA
AGLDPVIRIPDRIFEGYGPNSEAIRQLRADGATLLVTLDCGTTSHEVLAEAGRIGFDVVV
CDHHQADETLPAVAALVNPNRLDDLSGLGHLCAAGVTFMMVVALNRALRQRGFWTTGRPE
PDLMRLTDLVALGTIADVVPLKGLNRAFVARGLAVMRKRDNVGLRALMDVAKLDGPPTPY
HLGFLIGPRINAGGRIGDAGLGARLLVTDDALEAQRIAAELDRLNRERQVVELGTVAEAE
AEALAALGPMEEGTAVIVTAGNGWHAGVVGLVASRLKERFKRPAFAVAFTGDIGTGSGRS
LPGVDLGAVVRQAVSEGLLAKGGGHAMAAGITVMRGRLADFRAFLETKLEASVATARKQD
ALAIDAATTAAAIKPELAALIDRAGPFGSGNAEPVLVLPAHTIVYAEEVGTAHVRTRLKS
GDNATVDAIAFRAAGQPVGLALAEHRGRQLHVAGSISIDRWQGRERVQFRILDVAVPGRG
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgatcaacccgcggcggctgttcctcggggttgaacaatcggtcctcggtcgcgcctgg
cgcgaccggctggacgatccggcccgcgcccaggcgctggcgatcgcccaagtccatgac
ctgccggacatcctgtcgcgggtgctggccggccgcggcgtcatcgccgatggcgtcgag
gcctatctcgagccgaccgtcaaggcggccatgccggacccctcggttctgaccgacatg
gaccgggcggtcgaacggctcgtccacgcggtggtgacgaccgagagggtcgcgatcttc
ggcgattacgacgtcgacggcgcgacgtcctcggcggtgctggcgctgttcctgcgcgcc
gccggcctcgacccggtcattcgcatacccgaccgcattttcgagggttatggcccgaac
agcgaggccatccggcaattgcgcgccgacggcgcgacgctgctggtgacgctcgattgc
ggcacgaccagccacgaggtgctggcggaggctggccggatcggcttcgacgtggtggtc
tgcgaccaccaccaggccgatgaaacgctgccggcggttgccgccctggtcaatcccaac
cgcctcgacgatctctccggccttggccatctctgcgccgccggcgtcaccttcatgatg
gtggtggcgctgaaccgggcgctcaggcaacgcggcttctggacgaccggacggccggag
ccggacctgatgcggcttaccgacctggtggcgctcggcaccattgccgacgtggtgccg
ctgaaagggctcaaccgcgccttcgtggcgcgcgggctcgcggtcatgcgcaagcgcgac
aatgtcggcctgcgcgcgctgatggacgtcgccaagctcgacggcccgccgacgccttat
catctcggcttcctcatcggcccgcgcatcaatgccggcgggcggatcggcgatgccggc
ctcggcgccaggctcttggtcaccgacgatgccctggaggcccagcggatcgccgccgag
ctcgaccggctgaaccgcgagcgccaggtggtggaactcggcaccgtcgccgaagccgag
gccgaggcgctggcggcgcttggcccgatggaggagggcaccgcggtcatcgtcaccgcc
ggcaacggctggcatgccggcgtcgtcggcctggtcgcctcgcgcctgaaggaacggttc
aagcggccggccttcgcggtggccttcaccggcgacatcggcaccggatccggccggtca
ctgccgggcgtcgacctcggcgccgtggtgcgccaggcggtcagcgaagggctcctggcc
aagggcggcggccacgccatggcggccggcatcaccgtgatgcgcggtcggctggcggat
tttcgcgcctttctcgaaaccaagctggaggcgagcgtcgcgaccgcccgcaagcaagat
gcgctggcgatcgacgcggcaaccaccgccgccgcgatcaagcccgagctcgccgccctg
atcgaccgcgccggaccgttcggctcgggcaatgccgagccggtgctggtgctgccggcc
catacgatcgtttatgccgaggaggtggggaccgcccatgtccgcacccggctgaagagc
ggcgacaatgccaccgtcgacgccatcgcctttcgcgccgccgggcagccggttggcctg
gcgctggccgaacaccgtggccggcagctgcatgtcgccggctcgatctcgatcgatcgc
tggcagggccgggaacgggtgcagttccggatcctggacgtggcggttcccggacgcgga
tga
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