Phreatobacter stygius: E8M01_32765
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Entry
E8M01_32765 CDS
T05955
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pstg
Phreatobacter stygius
Brite
KEGG Orthology (KO) [BR:
pstg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pstg03032
]
E8M01_32765 (topA)
03400 DNA repair and recombination proteins [BR:
pstg03400
]
E8M01_32765 (topA)
Enzymes [BR:
pstg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
E8M01_32765 (topA)
DNA replication proteins [BR:
pstg03032
]
Prokaryotic type
DNA Topoisomerases
E8M01_32765 (topA)
DNA repair and recombination proteins [BR:
pstg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
E8M01_32765 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QCI69545
UniProt:
A0A4D7BG29
LinkDB
All DBs
Position
6934083..6936848
Genome browser
AA seq
921 aa
AA seq
DB search
MNVVIVESPAKAKTINKYLGSDYEVIASFGHVRDLPPKDGSVDPDADFAMIWEADGRGAK
RIAEIVKVVKGASKLILATDPDREGEAISWHLLEALREKRVLKDMPVERVTFNAITKQAV
LEAMANPRAIDVDLVEAYLARRALDYLVGFNLSPVLWRKLPGARSAGRVQSVALRLVCER
ESEIERFIKKEYWSLVATLATPRAETFEARLVGADGKKIQRLDVGAEAEARAFEKALHEA
HFAVAGVEAKPARRHPFPPFTTSTLQQEASRKFGFAPNRTMQVAQRLYEGVDIGGETVGL
ITYMRTDGVDVAPEAITEIRGLIGKDFGPRYVPGSPRKYVSKVKNAQEAHEAIRPTDARR
HPKDVARYLEAEQAKLYELIWKRTVASQMESAELERTTVDVTATVGGLGSSLGRKLELRA
TGQVVKFDGFLTLYTEDRDDDGDDEDGKRLPAMTVGEKVTKQAIATTQHFTEPPPRYSEA
SLVKRMEELGIGRPSTYAATLQTLQDREYVKIEKKRLVPEDKGRLVTAFLENFFNRYVEY
GFTAALEEKLDLVSNHELDWKALLRDFWRDFNAAIDSTKELRVTDVLAALNDSLGPHIFP
DKGDGSNPRLCPTCGTGALSLKLGKFGAFIGCSNYPECRFTRQLSAPSAEAVGDGPADAS
PDGTRRLGEDPVSGLEVTVRDGRFGPYIQLGEGEKPKRSSLPKGMTPAALDLERALALLA
LPKEVAVHPESGKPILVGLGRYGPYVQHDRTYANLEKDDDLLAIGANRAIDLIVAKESGG
GKGRFGRAAAAPGRELGDHPTLGGPMTVMAGRYGPYVKHGSVNATLPKGKSPEALTIEEA
VQLIAARAEMSGSSKKPFKRGKAASNGETKPEAKSAGKARSAKTGAAKIGAAKTGAAKTG
AAKARTGAGKSAAKAKPAAKA
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgtggtcatcgtcgaatcgcccgccaaggcgaagacgatcaataaatatctcggc
tcggactacgaggtcatcgcctcgttcggccacgtgcgcgatttgcccccgaaagacggg
tcggtcgacccggatgccgatttcgccatgatctgggaggccgacgggcgcggcgccaaa
cgcatcgccgagatcgtcaaggtggtcaagggcgcctccaagctgatcctggcgaccgac
cctgaccgcgagggcgaggccatttcctggcatctcctggaagcgctgcgcgaaaagcgc
gtgctgaaggacatgccggtcgaacgcgtcaccttcaacgccatcaccaagcaggcggtg
ctggaggcgatggccaatccgcgcgccatcgacgtcgacctggtcgaagcctatctcgcc
cgccgcgcgctcgactatctcgtcggcttcaatctctcgccggtgctctggcgcaagctg
cctggcgcccgctccgccggacgcgtgcagtcggtggcgctccgcctggtctgcgagcgc
gaatccgagatcgagcgcttcatcaagaaggaatactggtcgctggtggcgacgctggcg
acgccacgcgccgagaccttcgaggcgcgcctggtcggcgccgatggcaagaagatccaa
aggctcgacgtcggcgccgaagccgaggcacgtgccttcgagaaggcgctgcacgaggcc
catttcgccgtcgccggcgtcgaggcgaaaccggccaggcgccaccccttcccgccattc
accacctccaccctgcagcaggaggcgagccgcaagttcggcttcgcgccgaaccgcacc
atgcaggtggcccagcgcctctacgaaggcgtcgatatcggcggcgagacggttggtctg
atcacctatatgcgaaccgacggcgtcgacgtggcgcccgaggcgatcaccgagatccgt
ggcctgatcggcaaggatttcggcccgcgctacgtcccgggttcaccgcgcaaatacgtc
tccaaggtcaagaacgcccaggaggcccacgaggcgatccgtccgaccgatgcccgccgg
caccccaaagatgtcgcccgctatctggaggccgagcaggccaagctttatgagctgatc
tggaagcgcaccgtcgcctcccagatggagagcgccgaactcgagcgcaccaccgtcgac
gtgacggccaccgtcggcggcctcggctcgtcgctcggccgcaagctcgagctgcgcgcc
accggccaggtggtcaagttcgacggcttcctgacgctttataccgaagaccgcgacgac
gacggcgacgacgaggacggcaagcgcctgccggccatgacggttggcgaaaaggtcacc
aaacaggccatcgccaccacccagcatttcaccgaaccgccgccgcgctattccgaagcg
agcctggtcaagcgcatggaagagcttggcatcggccggccctcgacctatgccgcgacc
ctgcagacgctgcaggaccgcgaatatgtcaagatcgagaagaagcggctggtgcccgag
gacaagggccggctggtcaccgccttcctcgagaacttcttcaaccgctatgtcgaatat
ggcttcaccgccgcgctcgaggagaagctcgacctcgtctccaaccacgagctcgactgg
aaggcgctgttgcgtgacttctggcgtgacttcaacgcggcgatcgacagcaccaaggaa
ctgcgtgtcaccgacgttctcgcggcgctcaacgacagcctggggccgcatatcttcccc
gacaagggcgacggttccaacccgcgcctctgcccgacctgcggcaccggcgcgctgtcc
ctgaagctcggcaagttcggcgccttcatcggctgctcgaactatccggaatgccgcttc
acccggcaattgtcggcgccatcggccgaagctgtcggcgacggcccggccgatgcctcg
cccgacggcacgcgccggctcggcgaggatccggtcagcgggctggaggtcaccgtccgc
gacggccgcttcggcccctatatccagctcggcgaaggtgagaagccgaaacgttcgtcg
ctgcccaagggcatgacgccggcggccctcgatctcgagcgggcgctggccctgctggcc
ctgccgaaagaagtcgcggtccatcccgagagcggcaagccgatcctggtcggcctcggc
cgttatggcccctatgtccagcacgaccggacctatgccaatctggagaaggacgacgat
ctcctggcgatcggcgccaaccgggcgatcgacctgatcgtcgccaaggaaagcggcggc
ggcaaaggccgcttcggccgcgccgcggcggcgcccggccgcgaactcggcgaccacccg
acgctcggcgggccaatgacggtcatggccggccgctatggcccctatgtcaagcacggc
tcggtcaacgcgaccttgcccaagggcaagagcccggaagccttgaccatcgaggaggcc
gtgcagctgatcgcggcgcgtgccgagatgagcggctcgtcgaagaagccgttcaagcgg
ggcaaggccgcatccaatggcgaaaccaagccggaggccaaatccgccggcaaggcgcgg
tcggccaagaccggcgcagccaagatcggcgcagccaagaccggcgcagccaagaccggc
gcagccaaggccaggaccggtgccggcaagtccgccgccaaagccaagccggccgccaag
gcatga
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