Phreatobacter stygius: E8M01_33200
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Entry
E8M01_33200 CDS
T05955
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pstg
Phreatobacter stygius
Pathway
pstg03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pstg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
E8M01_33200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pstg03021
]
E8M01_33200
03400 DNA repair and recombination proteins [BR:
pstg03400
]
E8M01_33200
Enzymes [BR:
pstg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
E8M01_33200
Transcription machinery [BR:
pstg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
E8M01_33200
DNA repair and recombination proteins [BR:
pstg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
E8M01_33200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
DUF211
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
QCI68663
UniProt:
A0A4D7BDP5
LinkDB
All DBs
Position
complement(7027026..7028042)
Genome browser
AA seq
338 aa
AA seq
DB search
MIQKNWQELIKPEKLQIVGGDDAKRFATATAEPLERGFGVTLGNALRRILMSSLQGAAVS
AVQIDGVLHEFSSIAGVREDVTDIILNIKDIAIKMQGDGPKRMVLRKDGPGTVVAGDIQT
VGDVVVLNPELVICTLDEGAAIRMEFTVNTGKGYVPAEKNRAEDAPIGLIPVDSLYSPVK
KVSYQVSPTREGQVLDYDKLTLTVETNGSVTPDDAIAYAARILQDQLEIFVNFEEPRKEV
VQEQIPDLAFNPALLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKS
LNEIKEVLAQMGLHLGMEVSGWPPENIEELAKRFEDHY
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
gtgatccagaagaactggcaagaactgatcaagccggaaaagctccagattgtcgggggt
gacgatgccaagcgcttcgccaccgcgacggcggagccgctcgagcgtggcttcggcgtg
acgctcggcaatgcgctccggcgcatcctgatgtcgtcgctccagggcgccgccgtgtcg
gcggtgcagatcgacggcgttctgcacgagttctcgtcgattgccggcgtgcgtgaagac
gtcaccgacatcatcctgaacatcaaagacatcgccatcaagatgcagggcgacggaccg
aagcgcatggttctgcgcaaggacggcccgggcaccgtggtggccggcgatatccagacg
gtcggcgacgtggtggtgctgaaccccgagctggtgatctgcaccctcgacgagggcgcg
gcgatccgcatggagttcaccgtcaacaccggcaagggctacgtgcccgccgagaagaac
cgcgccgaggatgcgccgatcggtctgatcccggtcgacagcctctactcgccggtcaag
aaggtgtcctaccaggtctcgccgacccgcgaaggccaggtgctcgactacgacaagctg
acgctgacggtggaaaccaacggctcggtgacgccggatgacgcgatcgcctatgcggcg
cgcatcctgcaggaccagctcgaaatcttcgtgaacttcgaggagccgcgcaaggaagtc
gtccaggagcagatcccggatctcgccttcaacccggcgctcttgaagaaggtcgacgag
ctggaactgtcggtccgctcggccaactgcctgaagaacgacaacatcgtctatatcggc
gacctgatccagaagaccgaggcggaaatgctccgcactccgaacttcggccgcaagtcg
ctgaacgaaatcaaggaagtgcttgcccagatgggccttcatctcggtatggaggtttcg
ggttggccgccggagaatatcgaagagctggccaagcgcttcgaggaccattactga
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