Phreatobacter stygius: E8M01_33665
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Entry
E8M01_33665 CDS
T05955
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
pstg
Phreatobacter stygius
Brite
KEGG Orthology (KO) [BR:
pstg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pstg03019
]
E8M01_33665 (rnc)
03009 Ribosome biogenesis [BR:
pstg03009
]
E8M01_33665 (rnc)
03036 Chromosome and associated proteins [BR:
pstg03036
]
E8M01_33665 (rnc)
Enzymes [BR:
pstg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
E8M01_33665 (rnc)
Messenger RNA biogenesis [BR:
pstg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
E8M01_33665 (rnc)
Ribosome biogenesis [BR:
pstg03009
]
Eukaryotic type
90S particles
RNase
E8M01_33665 (rnc)
Prokaryotic type
rRNA processing factors
E8M01_33665 (rnc)
Chromosome and associated proteins [BR:
pstg03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
E8M01_33665 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
QCI68748
UniProt:
A0A4D7BG21
LinkDB
All DBs
Position
complement(7117515..7118321)
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AA seq
268 aa
AA seq
DB search
MAPGRKAKPIRPSLDELEARVGHVFADKDLLVRALTHPSAVTGADKRDKSYQRLEFLGDR
VLGLAVADMLFQMLPSDDEGTLSRRLSDLVRAETCADVAAELDLGAGVRVGPTESALQVG
RRASVLADLAEAVIGAVYLDGGWTAAEALVARHWRARVAAGPVHNRDAKSELQEWAQGRG
LPTPTYLVIDRTGPDHAPVFTMAVVIPGIEDGRGQGPAKRPAEIAAATAVLVREGVWTAA
SDRSTTKPAEPKRQAERAAGPADPPPWD
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
ttggctcccggtcgcaaagcaaagccgatccgcccgagcctcgatgagctcgaggcccgg
gttggccatgtctttgccgacaaggacctgctggtccgcgccctgacccatccgagcgcc
gtcaccggcgccgacaagcgcgacaaatcttatcagcggctggaattcctcggcgaccgc
gtgctgggcctggcggtcgcggacatgttgttccagatgctgccctcggatgacgagggc
acgctgtcgcgccggctgtcggacctggttcgcgccgaaacctgcgccgatgtcgcggcc
gagctcgatctcggcgccggcgtgcgggtcggcccgaccgaaagcgccctgcaggtcggc
cggcgcgccagcgtgctcgccgatctcgccgaagcggtgatcggcgcggtttatctcgac
ggtggctggacggcggccgaggccctggtggcgcggcactggcgcgcgcgcgtcgcggcc
ggcccggtgcacaaccgcgatgccaagagcgaattgcaggaatgggcgcaggggcggggc
ctgccgaccccgacctatctggtgatcgatcgcaccggcccggaccatgccccggtgttc
accatggcggtggtcattccgggcatcgaggacggccgcggccaagggccagccaaacgt
ccggccgagatcgccgccgccaccgccgtgctggtacgcgaaggtgtctggaccgcagct
tcggatcggagcacaaccaaacctgcggaaccgaagcggcaggccgaacgcgccgccgga
ccggccgatccgccaccctgggattga
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