Phreatobacter stygius: E8M01_34325
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Entry
E8M01_34325 CDS
T05955
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pstg
Phreatobacter stygius
Pathway
pstg03030
DNA replication
pstg03430
Mismatch repair
pstg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pstg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
E8M01_34325 (dnaE)
03430 Mismatch repair
E8M01_34325 (dnaE)
03440 Homologous recombination
E8M01_34325 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pstg03032
]
E8M01_34325 (dnaE)
03400 DNA repair and recombination proteins [BR:
pstg03400
]
E8M01_34325 (dnaE)
Enzymes [BR:
pstg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
E8M01_34325 (dnaE)
DNA replication proteins [BR:
pstg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
E8M01_34325 (dnaE)
DNA repair and recombination proteins [BR:
pstg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
E8M01_34325 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
T2SSK
DUF655
Motif
Other DBs
NCBI-ProteinID:
QCI68865
UniProt:
A0A4D7BE78
LinkDB
All DBs
Position
complement(7232455..7236003)
Genome browser
AA seq
1182 aa
AA seq
DB search
MQAACEVRGASRQWRLIAAAARGKAGGDQDSLPRGGTTVAPPRFVHLRVHSSFSLLEGAL
GIAKLAKLAAADRMPALAVTDTNNLFAALELSDKLAGAGIQAIAGLTLGVDFADREVDPR
RPNLGGIKPRIALLAMSEEGYRNLMALTSMAFMESTDVGDPSVGLAALQRHAGGLIALTG
GPRGPIDMALRDNQSDLARARLDRLTAIYGDGLYVELQRHGLDEERAVEPTLITEAYGRG
LPLVATNQCYFGSAADYESHDALGCIAGGRVLADPERKHLTPDHRFKTQAEMVALFADLP
EAIDSTIEIARRCHYRARTRKPILPRFSLEPGGEPVDEVAELNRQSREGLARRLAAHGPA
EGLTVKTYEDRLDFELSIIEKMQFPGYFLIVSDFIKWAKQRDIPVGPGRGSGAGSLVAYA
LTITDLDPLRFNLLFERFLNPERVSMPDFDIDFCQDRRDEVIRYVQERYGRSQVAQIITF
GTLQARGVLRDVGRVLEMPYGQVDKLCKLVPQNPTAPITLDKAIEGEPKLQAARDEEPVV
KRLFDIAVKLEGLNRHASTHAAGLVIGDRPLVELVPLYRDPKTDMPVTQFNMKWVEQAGL
VKFDFLGLKTLTVLQKAIDLIKLRGIAVDLATIPLDDAKSYEMMARGETVGVFQVESQGM
RKALVEMKASRFEDIIALVALYRPGPMANIPVYCARKLGQEKAEYPDPLLEQVLAETHGI
IVYQEQVMQAAQILSGYSLGEADLLRRAMGKKIKAEMDKQRERFVSGCTERGMAKAKADE
IFDLLAKFADYGFNKSHAAAYALVSYHTAWLKANYPVEFMAASMTLELSNTDKLSEFRRE
TLRLGITLEPPCVNRSGVHFDVAEGRVLYALAAVKGVGTQAVEAIVQARGDEPFRDLADF
AQRINPKTLNRKTLENLASAGAFDALEPNRARAVAAVEQVLAEAQRSSEGRLIGQDELFG
AGGASAIRVPDVEPWLPARRLDEEYRAIGFFLSGHPLDDYQAALKRLRIEPFVDFARSVR
GGASAGRLAGVVTARQERRTKTGNKMGIVTLSDASGHYEAVLFSEGLALYRDLLEPGQAV
LLSVGAELQGEDVRVRLLTVEPLDAAAIKVQKGFRVFVEEPGAIESIAKRLVAKGDGEVS
LVLRLPDAASEVEVKLPGRFAVSPQIAGAIKAVAGVQAVMEM
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcggcttgtgaagtgcggggagcttcgcgtcagtggcgattgatcgccgccgcg
gcgcggggcaaagctggtggtgaccaagactcactgccaaggggagggacgaccgtggct
ccaccacgtttcgtacatctgcgcgtccactcgtccttctcgctgctcgaaggcgcgctc
ggcatcgccaagctcgccaagctcgccgcagccgaccgcatgccggcgctggcggtgacc
gacaccaacaatctgttcgcggcactcgaactgtccgacaagctggccggcgccggtatc
caggcgatcgccggactgacgctgggcgtcgatttcgccgaccgcgaggtcgatccgcgc
cggcccaatctcggcggcatcaagccgaggatcgcgctgctcgcgatgagcgaagaaggg
tatcgcaacctgatggcactgacctccatggccttcatggagagcaccgatgtcggcgac
ccgagcgtcggcctggcggccttgcagcgccatgccggcggcctgatcgccctgaccggc
ggtccgcgcgggccgatcgacatggccttgcgcgacaatcagagcgatctcgcgcgcgcc
cggctcgaccggctgaccgccatctatggcgatgggctttatgtcgagctgcagcgccac
gggctcgacgaggagcgggcggtcgaaccgacgctgatcaccgaggcctatggccgcggc
ctgccgctggtcgccaccaatcaatgttatttcggcagcgccgccgattacgagagccat
gacgcgctcggctgcatcgccggcggccgggtgctggccgatcccgaacgcaaacacctc
accccggaccaccgtttcaagacgcaggccgagatggtcgcgctgttcgccgatctgccg
gaggcgatcgacagcacgatcgagatcgcccggcgctgtcactatcgggcgcgcacgcgc
aagccgatcctgccgcgcttttcgctcgagccgggtggcgagccggtcgatgaagtggcc
gagctcaaccggcagtcgcgggaaggcctggcgcgccggctcgccgcccatgggccggcc
gagggcctgaccgtcaagacctacgaggaccgcctcgatttcgagctctcgatcatcgag
aagatgcagttcccgggctacttcctgatcgtgtccgacttcatcaaatgggccaagcag
cgcgacattccggtcgggccgggccgtggttcgggcgccggctcgctggtcgcctatgcg
ctgaccattaccgatctcgatccgttgcgcttcaacctgctgttcgaacgcttcctcaac
ccggaacgcgtgtcgatgccggacttcgacatcgacttctgccaggaccggcgcgacgag
gtgatccgctacgtccaggagcgttacggccgcagccaggtcgcccagatcatcaccttc
ggcaccttgcaggcgcgcggcgtgctgcgcgacgtcggccgggtgctggaaatgccctat
ggccaggtcgacaagctgtgcaagctggtgccgcagaacccgacggcgccgatcacgctc
gacaaggcgatcgagggcgaaccgaaactgcaggccgcgcgcgacgaagagccggtggtc
aagcgcctgttcgatatcgcggtcaagctcgaaggcctgaaccgccacgcctcgacccat
gccgcgggcctggtcatcggcgaccggccgctggtcgaactggtgccgctctaccgagac
cccaagaccgacatgccggtcacccagttcaacatgaaatgggtcgagcaggccggcctg
gtgaagttcgacttcctcggcctgaagacgctgaccgtgctgcagaaggcgatcgacctg
atcaagctgcgcggcatcgcggtcgatctcgccaccatcccgctcgacgacgccaagagc
tatgaaatgatggcgcggggcgagacggtcggcgtgttccaggtggaaagccagggcatg
cgcaaggcgctggtcgagatgaaggccagccgcttcgaggacatcattgccctggtggcg
ctctaccggccgggcccgatggccaatatcccggtctattgcgcgcgcaagctcggccag
gaaaaggccgagtatcccgacccgctgctcgagcaggtgctggccgaaacccacggcatc
atcgtctaccaggaacaggtgatgcaggccgcccagatcctgtcgggctattcgctcggc
gaggcggatctgctcaggcgcgccatgggcaagaagatcaaggccgagatggacaagcag
cgcgagcgcttcgtctccggctgcaccgaacgcggcatggccaaggccaaggccgacgag
attttcgaccttctggcgaaattcgccgattatggcttcaacaagagccacgcggccgcc
tatgcgctggtatcctatcacacggcctggttgaaggcgaactatccggtcgagttcatg
gccgcttccatgacgctggaattgtcgaacaccgacaagctgtcggaattccggcgcgag
acgctccggctcggcatcacgctcgagccgccctgcgtcaaccgctccggcgtgcatttc
gacgtcgccgaggggcgggtgctctatgcgctggccgcggtgaagggggttggcacgcag
gccgtcgaggccatcgtccaggcgcgcggcgacgagccgttccgcgaccttgccgatttc
gcccagcgcatcaacccgaagacgctgaaccgcaagactttggaaaacctcgcatcggcc
ggtgccttcgacgcgctcgagccgaaccgggcgcgcgcggtggcagcggtcgagcaggtg
ctggccgaggcgcagcgcagttccgagggccggctgatcggccaggacgaattgttcggc
gcgggcggggcttcggcgatccgggtgcccgacgtcgaaccctggctgccggcgcgccgg
ctcgacgaggaatacagggcgatcggcttcttcctgtcgggccatccgctcgacgactat
caggcggcgctgaaacgcctgcggatcgaacccttcgtcgatttcgcgcgcagcgtgcgc
ggcggcgccagcgccggccggctcgccggggtggtgacggcgcgccaggagcggcgcacc
aagaccggcaacaagatgggcatcgtcaccttgtcggatgcgtcgggccattacgaggcg
gtgctgttctccgaaggactggcgctctatcgcgatctcctggagccggggcaggcggtg
ctgctgtcggtcggcgccgagctgcagggcgaagacgtgcgcgtccggctcctcaccgtc
gaaccgctggatgccgcggccatcaaggtccagaagggttttcgggttttcgtcgaggag
ccgggcgcgatcgagagcatcgccaagcgcctggtcgccaagggcgacggcgaggtcagc
ctggtgctgcgcctgcccgatgccgcaagcgaggtcgaggtgaagctgcccggccgtttc
gcggtctcgccgcagatcgccggtgccatcaaggcggtggctggcgtccaggcggtgatg
gagatgtga
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integrated database retrieval system
