Peredibacter starrii: SOO65_00050
Help
Entry
SOO65_00050 CDS
T09598
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
psti
Peredibacter starrii
Pathway
psti00300
Lysine biosynthesis
psti00470
D-Amino acid metabolism
psti01100
Metabolic pathways
psti01110
Biosynthesis of secondary metabolites
psti01120
Microbial metabolism in diverse environments
psti01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
psti00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
SOO65_00050 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SOO65_00050 (dapF)
Enzymes [BR:
psti01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
SOO65_00050 (dapF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
WPU65140
UniProt:
A0AAX4HP70
LinkDB
All DBs
Position
complement(7679..8461)
Genome browser
AA seq
260 aa
AA seq
DB search
MKNSLKFTKFSGNGNDFIILDHPTVEMTPAFVKKMCDRHFGVGADGILTLTEFAGTDGEM
RIFNADGGEAEMCGNGLRCLATYIDQKLNHAKNAYRIKTMNATYEVIRQENAFAIEMSEI
KDKNLYDLSHFHEFDRSFFINTGVPHLVFLVKDAKAIDIKPTAARYRYHSTFPNGTNVSF
VEIQKDYQTAYVRTYERGVEDETHSCGTGLTATALALNYWNGWKEMITLKTLGGTQRVLV
GDKVFYSGEVKHCFSGEYSL
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaactctctcaaatttaccaagttttcaggcaacgggaacgacttcatcatcctc
gatcacccaactgtggaaatgacccctgcctttgttaaaaaaatgtgcgaccgacacttt
ggtgtgggcgccgatgggattcttactctgactgaattcgccggcaccgacggtgaaatg
cgcatcttcaatgcggacggcggtgaagccgaaatgtgtggaaacggactaagatgtctt
gccacctacattgatcaaaaactaaatcacgcaaagaacgcatatcgtatcaaaacgatg
aatgcgacttacgaagtcattcgtcaggaaaatgctttcgccattgagatgtctgagatc
aaagacaagaatctttatgatctttcacactttcatgaatttgatcgcagtttctttatc
aacactggtgttcctcacctggtgttcctggtaaaagacgctaaggccatcgatatcaaa
ccgacggccgctcgttaccgctaccattcaacatttccaaatggcaccaatgtgagtttt
gtggaaatccaaaaagattaccaaacagcatatgtgcggacttatgagcgtggagtagaa
gatgaaactcactcttgtggaactggtctaactgcaaccgctcttgctcttaattactgg
aatggctggaaggaaatgatcacgcttaaaaccctgggtggaactcaaagagttctagtg
ggtgacaaagttttctattcaggtgaagtgaagcactgtttttctggagagtactctctg
tga
DBGET
integrated database retrieval system