KEGG   Peredibacter starrii: SOO65_00225
Entry
SOO65_00225       CDS       T09598                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
psti  Peredibacter starrii
Brite
KEGG Orthology (KO) [BR:psti00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:psti03400]
    SOO65_00225
Enzymes [BR:psti01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     SOO65_00225
    5.6.2.6  RNA 3'-5' helicase
     SOO65_00225
DNA repair and recombination proteins [BR:psti03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    SOO65_00225
SSDB
Motif
Pfam: WH_Lhr DEAD_assoc DEAD Helicase_C ResIII Cas3-like_C_2
Other DBs
NCBI-ProteinID: WPU65173
UniProt: A0AAX4HPD5
LinkDB
Position
complement(39309..41744)
AA seq 811 aa
MSSSRLDWIEKWFETKGWKAREFQLEAWKAYLRGENGLIHVSTGFGKTYAGVLAALADLT
LEEQKAPGIHILYISPLRALSADIIKSIQQPIDEMKLPYTVEGRTGDTSASQRAKQKKNP
PSILVTTPESFNLLLASEEYREALKKCRLVVIDEWHELMGNKRGVQVQLCLAHLKKLAPN
LRIWGLSATVGNPELAGRVLNGNVLKNFVFITEKVSKEIEVQTLLPDEIDSFPWSGHLGL
AMLEKVINHVDIKQSCLLFTNVRSQSERWYNEILLRKPEWEPIMAIHHSSIDRERREEVE
NKIKTGELKLVICTSSLDLGVDFPMVERVYQVGSPKSISRFIQRAGRSGHTPTGVPRIYF
VPTHALELFEYMATELAIDRGLKEDIIPPELSFDVLAQHMVTLASGEGLIPSEAFEEIRH
TYAYQKIERYQFDNLLLFLTQGGRSLSAYPYYHRLKELNGRYLVHDKKMIQQHLMNVGTI
TSDPSMRIKFAKGGSLGSVEESFVSKLKKGDRFVFSGKVLEFMMIKDMTVFVRLAPPKAA
VVPIWWGSRLPLSSLLTSHLKEIFELIEQGRYQHPLIEFLSPIIEVQKALSRLPGRNYLL
LEETLTREGRHLFIFPFEGRLVHEALAALLSVRLSLRTKVTFSFAVSEYGLEILAPSDYK
FDLEVIKECLSLDNLTNDIQRSLNMTQLAKKQFRDIAQVSGLVYQNRMGEKRTMKNLQMS
SSLLFEVFSKYEPEQPLYNQSFDEVRFFQFQESRLVSVLRKIKEMPFELYKTSRPSPLAF
PLIIERIGSLVSSESLQDRLQRMKEKWKQVS
NT seq 2436 nt   +upstreamnt  +downstreamnt
atgagcagtagcagattagactggattgaaaaatggtttgagaccaagggttggaaggcc
cgggaatttcagctggaggcctggaaggcgtatctgcgtggagaaaatggactcattcac
gtttcaactggcttcggaaagacctatgcaggagtgctggccgctcttgctgatttgacc
ctcgaagaacaaaaggcacccggcatccacatcctctacatttctcctctgcgtgctctc
agcgctgatatcatcaaatctattcaacaacccatcgatgaaatgaaacttccctatacg
gtggaaggaagaacaggggacaccagtgcttctcaaagagcaaaacaaaaaaagaatcca
ccttctattcttgttactacccccgaatcattcaatcttctgctcgcatctgaggagtac
cgtgaggccctgaaaaaatgccgattagttgtcatagatgagtggcatgaactcatgggg
aacaagcgaggagtgcaggttcaactatgtctcgctcatttaaaaaagctcgctcctaat
cttcgaatctggggactttctgcgacggttggaaatcccgaactcgcgggacgagtttta
aatgggaacgttttgaagaactttgttttcatcacagagaaggtctcaaaagaaattgaa
gtccaaacccttcttcccgatgagatcgattcattcccttggtcagggcacttaggactc
gcgatgcttgagaaggtgattaatcacgtggatatcaagcagtcctgtcttctctttacc
aatgtccgctctcaatcagagcgttggtacaacgaaatccttcttcgaaaacccgagtgg
gaacccatcatggccattcaccactcttcaattgatcgagagcgaagagaagaggttgaa
aataaaataaagaccggagaattaaaactcgtgatctgtacctcaagtctggatctagga
gtagattttcccatggttgaacgagtctatcaggttggatcccctaaaagtatttctcgc
ttcattcaacgtgccggacgctctggtcacacgcctacaggggtgcctcgaatttacttt
gtgccgactcacgctcttgagctctttgaatatatggcaactgaactcgctattgatcga
ggtcttaaagaagacattattcctcctgaacttagttttgatgttttggcccagcatatg
gtgactcttgcttcgggagaaggacttattccttctgaggccttcgaggaaattcgccac
acctatgcttaccaaaaaatagagcgctatcaatttgataatcttcttctatttcttact
caaggaggaagaagcttaagtgcgtatccttattatcatcgtctgaaagaattaaacggt
agatacctggtccacgacaaaaaaatgattcagcagcatctcatgaatgtcggaaccatt
acctctgatccatccatgcgaattaagtttgccaaggggggaagtctggggtcggtggaa
gaatcttttgtgagtaagcttaaaaaaggggaccggtttgttttttctggaaaagtttta
gagttcatgatgatcaaggacatgacggtctttgtgaggcttgctccgcccaaggccgcc
gtggtgccaatctggtggggaagtcgtttgcctctctcctctcttctcacaagtcatttg
aaagagatatttgaattaatcgaacaaggtcgctatcaacatcccctgattgaattcctt
tctcctattattgaagttcagaaagcactttcacgtcttcctggaagaaattatttatta
ttggaagagacacttacgcgagaagggaggcatttgttcatttttccatttgagggaaga
ctcgtgcatgaggccctggcggccttactctctgtccgactttcccttagaaccaaggtc
acattcagcttcgccgtttcagagtatggcctagaaattcttgcaccctctgattataaa
tttgatctagaagtgattaaggaatgtctttctctggataatctcacaaacgatattcaa
cgcagtcttaatatgacccaactcgcgaagaaacagtttagggacattgctcaggtctca
gggctagtttatcaaaaccgcatgggtgagaagagaaccatgaagaacctgcagatgagt
tcctcgctcttgtttgaggtcttctctaaatacgaacccgagcaaccactttataatcag
tcctttgatgaagtgcggttttttcagtttcaggaaagtcgcctcgtctctgtactccga
aaaattaaagaaatgccgtttgagttatataagacttcccggccttcgcctctggccttt
cctttgatcattgaaagaattggatccctagtatcttccgagtctttacaagatcgtttg
caacggatgaaagaaaaatggaaacaagtctcgtaa

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