Peredibacter starrii: SOO65_00505
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Entry
SOO65_00505 CDS
T09598
Name
(GenBank) sigma 54-interacting transcriptional regulator
KO
K02584
Nif-specific regulatory protein
Organism
psti
Peredibacter starrii
Pathway
psti02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
psti00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SOO65_00505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psti03000
]
SOO65_00505
Transcription factors [BR:
psti03000
]
Prokaryotic type
Helix-turn-helix
Other families
SOO65_00505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_5
AAA_2
AAA
AAA_16
AAA_7
HTH_50
Mg_chelatase
Parvo_NS1
nSTAND3
AAA_3
Motif
Other DBs
NCBI-ProteinID:
WPU65227
LinkDB
All DBs
Position
complement(99983..101581)
Genome browser
AA seq
532 aa
AA seq
DB search
MIDWKAIKDLHTTKSLEKIVGNWYGLDVLYVDTQGRVQFVQEPGYSFKSPFLKLQMSHSF
GHDWLEADVEKVFEFFNSSSEMSYEFDAFFPGTYGYSHKVVVDDEFCGVVIAYPYFKDTS
TTEEVENVVKKVVECGIGQEDAKVAVSKIKKFAGRFYDEMKELVAIVADEVGTFHHEISK
REARIMDLNSEIGNKYRYHNLIGKSKKMQQVYHLLSKVSNSESTIMIQGENGTGKEMVAK
AIHYNSPRKDAVFMAVNCSAFNDNLLDSELFGHVKGAFTGAIKDKKGVFEVANGGTLFLD
EIGDTSPSMQVKLLRILQEGTFMPVGATQPKKVNVRVVAATNKNLKEMIAKGEFREDLYY
RINVINVALPPLRERQEDIPVLMDFFLQKRCEEAGLPLKTFSKKCLEKMLDHTWPGNVRE
LQNEVERLVVIAGEDKNITPDMLSSRILESGESHGHAPSHSGGSFLKGVNTNGSLKDALE
ELEILMIREGLKRCAFNKSKLAKELGISRAGLIMKVEKYGLDKRAQKRAAGE
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgattgattggaaagcgattaaggatctacatactacgaaaagcctcgagaagattgtt
ggtaattggtacgggctggacgtgttgtatgttgatactcaaggccgcgtgcagttcgtg
caagagccgggttattcattcaaatcacctttcttaaaactacaaatgtctcattcattc
ggtcatgactggctggaagcagatgttgaaaaagtattcgaatttttcaactcgtcttca
gagatgagttatgagttcgatgctttcttcccgggaacatatggttactcacataaagtg
gtagtagacgatgagttctgtggagtggtgatcgcttatccatatttcaaagatacttca
acaactgaagaggttgagaatgttgttaaaaaagttgtcgagtgtggcattggccaggaa
gacgctaaagttgcggtttctaaaattaaaaaattcgcgggtcgcttctacgacgagatg
aaagaacttgtggcgatcgttgcggatgaagtgggcactttccaccacgaaatttcgaag
cgtgaggctcgcatcatggaccttaactctgagatcggtaacaaataccgttatcataac
ctgattggtaaatcgaaaaagatgcaacaggtttatcaccttctttcaaaagtatcgaac
tctgaatctacaattatgattcaaggtgagaacggtaccggtaaagaaatggtggcgaag
gcgatccactataattcaccaagaaaagatgctgttttcatggcagtaaactgttcagcg
tttaacgataaccttctagactcagaactgttcggtcacgtgaaaggtgcgtttacaggc
gcgatcaaggacaagaaaggtgtattcgaagttgctaacggcggaacactgtttctggat
gaaatcggggacacgtctccatcaatgcaggtaaaacttcttcgtatccttcaagaaggt
acgttcatgccggtgggtgcaactcagccgaagaaagtaaatgtacgcgtagtggcggca
acgaacaaaaaccttaaagagatgatcgctaaaggtgagttcagagaagatctttattac
agaattaacgtgatcaacgtggcccttccacctcttcgtgagcgtcaggaagatattccg
gtcctgatggatttcttccttcagaagcgttgtgaggaagcaggtcttccacttaagacc
ttctcgaagaagtgtcttgagaagatgctggatcacacatggccaggtaacgtacgtgaa
cttcaaaacgaagttgagcgtctggttgtaatcgcgggtgaagataaaaacatcacgccg
gatatgctttcttcaagaattctggaaagcggagagtctcatggtcacgctccatctcac
tctggtggtagcttccttaaaggtgtgaacacaaacggttcactgaaagatgctctggaa
gaactagagattctgatgatccgtgaaggtctaaaacgttgtgccttcaacaagtcaaaa
cttgcgaaggaacttggtatttctcgcgcgggtctgattatgaaggtcgagaagtacggc
cttgataagcgagctcagaaaagagcagcgggcgaatag
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