Peredibacter starrii: SOO65_01425
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Entry
SOO65_01425 CDS
T09598
Symbol
dnaN
Name
(GenBank) DNA polymerase III subunit beta
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
psti
Peredibacter starrii
Pathway
psti03030
DNA replication
psti03430
Mismatch repair
psti03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psti00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SOO65_01425 (dnaN)
03430 Mismatch repair
SOO65_01425 (dnaN)
03440 Homologous recombination
SOO65_01425 (dnaN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psti03032
]
SOO65_01425 (dnaN)
03400 DNA repair and recombination proteins [BR:
psti03400
]
SOO65_01425 (dnaN)
Enzymes [BR:
psti01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SOO65_01425 (dnaN)
DNA replication proteins [BR:
psti03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SOO65_01425 (dnaN)
DNA repair and recombination proteins [BR:
psti03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SOO65_01425 (dnaN)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_beta
DNA_pol3_beta_2
DNA_pol3_beta_3
Motif
Other DBs
NCBI-ProteinID:
WPU65401
UniProt:
A0AAX4HQM0
LinkDB
All DBs
Position
256600..257712
Genome browser
AA seq
370 aa
AA seq
DB search
MKLTIQSQILRDAINKVLSVVDKKNSRPILTNCLIKSQGQKLELIATDLEVSAKILLNAQ
IEQEGSFCINSKNIADILRELPNDDVIMSVDNNNLLNLTCKNINYSLLVTSTEEFPQLSF
QNSSSEFRLKTKQIAQIINKTSHAISTDETRLYLNGIYLQMTDSKLRAVAIDGHRLALLD
THEFIGENKFLVDGVIVPRKGISELKKIADTYPEDDVSISLDDSFMFVNARNEYYLSIRL
IAREYPKYQTVIPSKTTNRFHIDRNAILNAVKRIKILSNEKTNGVKLNIQKNEIVISTNH
PALGQATETLPITYDGKATEIGFNAKYLIESLSVLNETDVTFEFNNELSPVVIKADDLPE
FLGIIMPLKL
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgaaactaacgatccaatcacagatccttcgtgatgccattaacaaggttttatctgta
gtagataaaaagaactcacgtccaattcttacgaactgcctgattaaatctcaaggtcag
aaactagaattgatcgcaactgatttggaagtttcggccaagattcttttaaacgctcaa
attgaacaggaaggttctttctgtatcaattctaaaaatatcgcagacatcttaagagaa
cttcctaacgatgatgtgatcatgagtgtggataacaacaatcttttaaatcttacttgt
aaaaacatcaattattcacttttggtgacaagtactgaggaatttccacaattaagtttt
caaaactctagttctgaattccgtttaaagacaaaacagatcgctcagatcattaacaag
acttctcatgccatctctaccgatgaaacgagattgtaccttaatggtatttatcttcag
atgactgattctaagctaagagcagtggccatcgacggtcaccgtctggcgttgttagat
actcacgaatttatcggcgaaaataaattcctggtagatggtgtaatcgttccacgtaaa
ggtatctctgaacttaaaaagatcgctgatacatatcctgaagatgatgtttcaatctct
ctagatgattcattcatgttcgtgaacgcacgaaatgagtactatctttcaattcgttta
attgctcgtgaataccctaagtatcaaacagtaattccttctaagaccactaaccgtttc
catatcgatagaaatgccatcttaaacgctgttaaacgcattaagatcctttctaacgag
aagaccaatggggtgaagcttaatattcagaaaaacgaaattgtgatctctaccaatcac
ccggccctaggtcaggcgactgaaactttacctatcacttacgatgggaaagcaactgag
attggtttcaacgctaaatatcttatcgagagcctttcagttctaaatgaaactgatgtg
acttttgaatttaacaacgaactaagcccggttgtgattaaagctgatgatcttccagag
ttcctgggaatcattatgccgcttaagttgtaa
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