Peredibacter starrii: SOO65_01480
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Entry
SOO65_01480 CDS
T09598
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
psti
Peredibacter starrii
Pathway
psti03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
psti00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SOO65_01480 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psti03400
]
SOO65_01480 (uvrA)
DNA repair and recombination proteins [BR:
psti03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SOO65_01480 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SOO65_01480 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
nSTAND1
AAA_16
AAA_23
RsgA_GTPase
DnaJ_CXXCXGXG
AAA_22
AAA_25
AAA_15
nSTAND3
NACHT
AAA_33
BCA_ABC_TP_C
NTPase_1
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
WPU65412
UniProt:
A0AAX4HQH6
LinkDB
All DBs
Position
complement(270759..273560)
Genome browser
AA seq
933 aa
AA seq
DB search
MEKIQVTKAKVHNLKNIDVSLPRHSLTVITGPSGSGKSSLAFDTIYAEGQRRYIESLSSY
ARQFIGQIEAPEVESITGLSPAIAIDQKSTTKNPRSTVGTITEIYDYLRLLYARLGEAHC
PETGEKVAKQSPQQIVEQICKFKTGTKLQILSPVIRSKKGEHKEELAKYTSMGFTRVRLN
GEIMNLEDNISINKSRFNDIDIVVDRLVIKEGVKPRLTESVENALKLSDGYLVVLADEVE
HFYSEKNYSFKSGKSYPDLEPRLFSFNSPLGACPTCNGLGISKRFDIDGLLFDEKLSLEE
GAMPIVKKNSFLMQMVRSVAEAEKVDIEKPFHKLSEKFRTILYDGSDKVYNYKFESENSS
WNFKKEFPGVVAWLEKKYNESESEKTRADLEEYMIIKKCPSCKGKKLSPFALAATIKGQS
IMDVCDLSINEAAVFFDSLEFTGNQAIIAHKVLKEVKDRIKFLLNVGLNYLTLNRDAMTL
SGGESQRIRLATQIGSALSGVLYVLDEPSIGLHQRDNEKLIKTLIDLRDIGNTVLVVEHD
EDTMLASDYLIDMGPQAGIHGGEIVAAGTPEEVKKNKKSITGKYLSGDLKIEVPKKRRDL
KDHIVLNKAKEHNLQDVTLKLPLGGMTCITGVSGSGKSTLVHKVLIPAVKNYLSRGRRGS
SANYQSITGVDKIQSLIELDQSPIGRTPHSNPATYTGLFDDIRNIFSQTNESKVRGYKPG
RFSFNVKGGRCETCEGNGMLKIEMHFLPDVYVTCSECRGSRYNNETLSILYRGKNIADVL
AMSIEEAEPFFENHPKVNRALKVLNAVGLGYIKLGQPATTLSGGEAQRLKLSRELSKSTK
GSCLYVLDEPTTGLHFEDINILLKALNKLIDQNHSLLIIEHNLDVIKTADWVIDLGPEGG
KGGGQIIAEGTPETVAKVKASHTGRYLAKALKS
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaattcaagtcaccaaagcaaaggttcacaatcttaaaaatattgatgtctca
cttccgaggcattcgttaacagttatcacgggcccatctggttcgggaaaatcatcgctc
gcgttcgatactatctatgctgaaggtcagcgtcgctatattgaatctctttcaagttac
gctcgacagttcattggacagattgaggccccggaagttgaaagcatcaccgggctatct
ccggcgatcgcgattgatcaaaaatccacgactaaaaatcctcgttcaaccgtaggaacc
attactgaaatctacgattaccttcgtttgctctacgcccgcttaggtgaagctcactgt
ccggaaactggcgagaaggtggcgaaacaatccccacaacaaatcgtagaacaaatttgt
aaatttaagaccggtacaaaacttcagatcctctctcccgtcattcgttccaagaaaggg
gagcataaggaagaactcgctaaatacaccagcatgggttttactcgtgtgcgcttaaat
ggcgagatcatgaatctggaagataatatctcaatcaacaagtctcgctttaatgacatt
gatatcgtggttgatcgtttagtaattaaagagggagttaaacctcgtctcactgaatca
gtggaaaacgccctgaagctttctgacggttacctggttgtactcgcagatgaagtggaa
cacttctactcagagaaaaactactctttcaaatccgggaaaagttatccggatctagaa
ccgcgtctcttctcatttaactcaccactaggtgcttgcccgacatgtaatggtctgggc
atttcaaaacgctttgatattgatggacttctttttgatgaaaaactttcattggaagaa
ggagcgatgccgattgttaagaagaactcttttctcatgcagatggttcgctcagtggca
gaggccgagaaagtcgacatcgaaaaaccctttcataagctttcagaaaaattccgcacc
attctttatgacggaagtgacaaggtctataactacaagtttgaatcagaaaactcttcc
tggaactttaagaaagaattcccgggagtcgtggcctggttagaaaaaaaatacaacgaa
tcagaatctgaaaagacccgcgcggatcttgaagaatacatgatcattaaaaagtgccca
agctgtaagggaaagaaattaagtcctttcgccctggcggcgacgattaaaggtcagtcc
atcatggatgtgtgtgatctctcaatcaatgaagcagcggtcttctttgattcgcttgag
ttcactggcaaccaggcaatcatcgcgcacaaagttttgaaagaagttaaagacaggatc
aagtttctcctcaacgtgggacttaattacctgactctcaaccgtgatgccatgacctta
tcaggtggtgaatcacaacgtattcgtcttgcgactcaaatcggttctgcactctcgggt
gtcctttacgttctggatgaaccaagtattggtcttcaccaacgtgataatgaaaaactc
attaagaccctgattgatcttcgagacattggtaacaccgttctggtggtagagcatgat
gaagataccatgctcgcttctgactacttaattgatatgggtcctcaggccgggattcac
ggtggtgaaattgtagcggcgggaactccggaagaagttaagaagaacaagaaatccatc
acgggcaaatacctttcaggtgatctcaagattgaagttcctaaaaaacgccgggacctg
aaagatcatatcgttttaaataaggcgaaagagcataacctccaggacgtgactttaaaa
cttcccctcggtggcatgacttgtatcactggggtttcaggttcaggaaaatcaactctg
gttcacaaggtgctaataccagcggttaaaaattatctctcgcgcggtcgtcgcggaagt
tctgctaattatcagtccattactggcgttgataaaattcaaagtttgatcgagctagat
cagtctccaattggaagaacacctcactcaaacccggccacttatactggtctctttgac
gatattcgaaacatcttctcgcaaaccaatgaatcaaaagttcgtggttataagccagga
cgcttttccttcaatgtaaagggtgggcgttgtgaaacctgtgaaggaaacggaatgctt
aaaatcgagatgcatttccttcccgatgtttatgtgacttgttctgaatgccgaggttct
cgttataataatgagaccctttctattctttatcgtggaaagaatatcgctgatgttctc
gccatgagtattgaagaggccgagcctttctttgaaaaccatccgaaggtcaatcgtgca
cttaaggtactgaatgccgtgggccttggttatatcaaacttggtcaaccggccaccaca
ctttctggtggtgaggcccaacgtttgaaactttctcgcgagctttctaaatctactaaa
ggctcatgtctttatgtgctagatgaaccgaccaccggcctgcattttgaagatattaat
attctgctgaaggccctgaacaaactcattgatcaaaaccattcgcttctcatcattgaa
cataaccttgatgtgattaagaccgcggactgggtaattgatttgggacctgaaggtggt
aagggtggaggccagattattgcggaaggaactccagagacagttgctaaggtgaaagct
tcccataccggtcgttaccttgctaaagcactgaaatcctga
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