Peredibacter starrii: SOO65_02750
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Entry
SOO65_02750 CDS
T09598
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
psti
Peredibacter starrii
Brite
KEGG Orthology (KO) [BR:
psti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psti03009
]
SOO65_02750 (rimO)
Enzymes [BR:
psti01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
SOO65_02750 (rimO)
Ribosome biogenesis [BR:
psti03009
]
Prokaryotic type
ribosomal protein modification factors
SOO65_02750 (rimO)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
NAGidase
Motif
Other DBs
NCBI-ProteinID:
WPU65655
UniProt:
A0AAX4HRK2
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All DBs
Position
535577..536956
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AA seq
459 aa
AA seq
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MSLDTKKFQEKSLYFTSLGCSKNLVDSQVMLGHLKLDGFTIAQAPEDAEVIIVNTCSFVE
AAKVESIETVLDLATYKEDGKCQALVMSGCMAQRYAGELEAEMPEIDMFIGTGEYHKIVP
LLKAMEDGKLEKKSFVEIPKFIHTEFDPRLNTSPFYMAWLKISEGCNRNCTFCIIPTLRG
KLRSRTVDSLVAEAEQLAKTGVRELNLISQDFSDYGVDLEGGGKKDGKNPMIYELLSRLE
KVEGIDWVRVFYFYPDDLTEDVMDLMASSKKITKYLDMPVQHFADGVLKRMNRRVTEEVI
HQKIKTLREKIPGIVLRTSIIVGFPGETEEDFQALLRGIKEARFNHLGVFKYSDEEGTPA
VRLKNKVPQEVIDERFEQLYEAQKEIARELNQEYLGKVIDVLVEGQHEETELLLQGRHAG
QAPDIDGKVIINDGMAKAGDIVRVEITDVLDYDLVGRII
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgagtctcgatacaaaaaaattccaagagaaatctctctactttacctcattgggttgt
tctaagaacttagttgattcacaagttatgttgggtcacctaaaactcgatggtttcaca
atcgctcaagctccagaagatgctgaagtgattatcgttaacacatgttcatttgttgag
gctgcgaaagttgaatcaattgaaacagttttagatctagcgacttacaaagaagatggt
aagtgccaggcgcttgttatgtcaggttgtatggcccaaagatatgcgggtgagcttgaa
gctgaaatgccagaaatcgatatgttcatcggtacaggtgaatatcacaagatcgttcca
cttcttaaagcaatggaagatggaaaacttgaaaagaaatcattcgtagaaattccaaaa
ttcattcacactgaattcgatcctcgtctgaatacttctccattctatatggcatggtta
aaaatctcagaaggatgtaaccgtaactgtactttctgtattatcccgactcttcgtgga
aaacttcgctctcgtacagttgattcacttgttgctgaagctgaacagctggcaaaaaca
ggtgtgcgtgagttgaaccttatctctcaagacttctctgattacggcgttgatctagag
ggcggcgggaagaaagacggcaaaaacccaatgatctatgagcttctttctcgtcttgag
aaagttgaaggcattgattgggtacgcgtattttacttctacccggatgatttaactgaa
gacgtgatggaccttatggcctcgtctaagaagatcacaaagtatcttgatatgccagtt
cagcattttgctgatggtgtgttaaagagaatgaatagacgtgtaactgaagaagttatc
caccaaaaaattaaaactcttcgcgagaagattccaggaatcgttcttagaacttcgatc
atcgtaggtttccctggtgaaacagaagaagacttccaggcccttttaagaggtatcaaa
gaagctcgcttcaatcaccttggcgtattcaaatactctgatgaggaagggactccagca
gttcgtcttaagaacaaagttcctcaagaagtgatcgatgaaagattcgaacaactttat
gaagctcaaaaagaaattgcacgagaacttaaccaggaatacctgggcaaggtcatcgat
gtgttagtagaggggcagcatgaagagactgagctactcctgcaaggtcgtcatgctggt
caggcccctgatatcgacggtaaagtgatcatcaacgatggtatggcgaaggccggtgac
atcgtaagagtggagatcactgacgttcttgattacgacctagttggcagaattatctaa
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