KEGG   Peredibacter starrii: SOO65_02805
Entry
SOO65_02805       CDS       T09598                                 
Symbol
rny
Name
(GenBank) ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
psti  Peredibacter starrii
Pathway
psti03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:psti00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SOO65_02805 (rny)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:psti03019]
    SOO65_02805 (rny)
Messenger RNA biogenesis [BR:psti03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     SOO65_02805 (rny)
SSDB
Motif
Pfam: RNase_Y_N HD HDOD KH_1 dUTPase KH_PNO1_2nd Toprim_Crpt KH_KhpA-B MIOX FUT8_N_cat
Other DBs
NCBI-ProteinID: WPU65666
UniProt: A0AAX4HQY9
LinkDB
Position
544713..546266
AA seq 517 aa
MNPMMMAVVGVIVGAIVAYLAVSMKNASAQKSKEGAAQDILAKAQADAEEVKKKAEEKAK
QIVRDERNRLEDEMEKKKKHLSDFERGLTKKEVALEQKTEQIQKDTDRVKAKETEIETRV
QKLDAEIKKNIEIQDDLANKLTQVAGLTKEQAKNELIAQVEEEARLDAAKKVKRIEEEAN
EEAEKRSKRIVGIAIQRFAGEYVAEQTISSVEIADDGVKGRLIGREGRNIRAFEQICGVD
LIIDDTPGVVTISSFNVVRKEISRMTIERLIADGRIHPAKIEEFYEKCKHEFESRLRELG
EKAQMEIGVHGIHPEILKLIGALNWRTSYTQNQYQHALETAFLAGNMAAELGMNVKQARR
AGLMHDIGKVLDASAEGSHAVIGADFAKKYGESPDIVHAIRAHHDDEKPESVLAHLVAAG
DALSGARPGARKALKESYVSRLSDIEKIVNGFEGVQRSYAISAGREIRVMVENEKVSDEQ
TIMLSRDIARKIEQEMSYPGTIKVSVIRETRAVGIAK
NT seq 1554 nt   +upstreamnt  +downstreamnt
atgaatccaatgatgatggccgtagttggcgtgatcgttggtgcaatcgtagcttaccta
gcggtatctatgaagaatgcatcagctcagaagtccaaagagggcgcggcacaagatatc
ctggcaaaagctcaggcagacgctgaagaagttaagaagaaagctgaagaaaaagcgaaa
caaattgttcgtgatgaaagaaaccgacttgaagatgaaatggagaaaaagaaaaagcac
ctttctgatttcgagcgcggcctgactaaaaaagaagtggccctagagcagaagactgaa
caaattcaaaaagacactgaccgtgttaaagcaaaagaaactgaaatcgaaactcgcgtt
cagaaacttgatgctgaaatcaaaaagaacattgaaatccaggacgaccttgctaacaag
ctaactcaggttgctggtcttacaaaagaacaagctaaaaacgaacttatcgctcaagtt
gaagaagaagctcgtcttgatgctgctaagaaagttaagcgtattgaagaagaggccaac
gaagaagctgagaagagatctaagcgtatcgttggtatcgccatccagcgttttgctggt
gaatatgttgctgaacaaacaatctcttcagtggaaatcgctgatgatggtgtgaaaggt
cgtctaatcggtcgtgaaggtcgtaacatccgtgctttcgagcagatttgtggtgtggat
ctcattatcgatgatactcctggtgtcgtaacgatttcttcattcaacgttgttcgtaaa
gaaatctctcgtatgacaattgagcgtcttatcgccgatggtcgtattcaccctgctaaa
attgaagagttctacgaaaaatgtaaacacgagtttgaatctcgtctacgtgaacttggt
gagaaggcccagatggaaatcggtgttcacggtatccaccctgaaattctaaaactaatt
ggtgcccttaactggcgtacttcttatacacaaaaccaatatcagcacgctctagaaaca
gcattccttgctggtaacatggcggctgaacttggcatgaacgtaaaacaagctcgtcgt
gctggtcttatgcacgatatcggtaaagtacttgatgcttcggcagaaggttctcacgcg
gttatcggtgctgacttcgctaaaaaatacggagagtctccggatatcgttcacgctatc
cgcgctcaccacgatgatgaaaaaccagaatcagtacttgctcacttagtagctgctggt
gatgctctttcaggtgctcgtccaggcgctcgtaaggcccttaaagagtcttatgtatct
cgtctttctgatatcgagaaaattgttaacggtttcgaaggtgttcaacgttcttacgcc
atctctgctggtcgtgaaatccgcgttatggttgagaacgagaaagtatctgatgaacaa
acaattatgttgtctcgtgatatcgctcgtaagattgagcaggagatgtcatatcctggt
acaatcaaggtttctgtaatcagagaaacaagagcagtcggaatcgcgaagtaa

DBGET integrated database retrieval system