Peredibacter starrii: SOO65_03245
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Entry
SOO65_03245 CDS
T09598
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
psti
Peredibacter starrii
Pathway
psti03030
DNA replication
psti03410
Base excision repair
psti03420
Nucleotide excision repair
psti03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psti00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SOO65_03245 (polA)
03410 Base excision repair
SOO65_03245 (polA)
03420 Nucleotide excision repair
SOO65_03245 (polA)
03440 Homologous recombination
SOO65_03245 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psti03032
]
SOO65_03245 (polA)
03400 DNA repair and recombination proteins [BR:
psti03400
]
SOO65_03245 (polA)
Enzymes [BR:
psti01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SOO65_03245 (polA)
DNA replication proteins [BR:
psti03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
SOO65_03245 (polA)
DNA repair and recombination proteins [BR:
psti03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
SOO65_03245 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SOO65_03245 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
HHH_5
Motif
Other DBs
NCBI-ProteinID:
WPU65754
UniProt:
A0AAX4HS65
LinkDB
All DBs
Position
646916..649555
Genome browser
AA seq
879 aa
AA seq
DB search
MKKLIIIDISNYIFRAFFAIRPLHAPDGTPVNAVYGVLSMVHNLIVKYQPTHIIVARDTK
EGSFRKVIYTEYKANRSAPPDELVPQFPLVDELIQVLGLPEIKAPNYEADDVIGSVATQW
KNDFDEILIASGDKDLMQFVDGPIKILDTMKEKIYSREDVKDKMGVYPEQIVDYLSLIGD
SSDNIPGVDGIGPKGAQNLIEEFGTLENILENIPSIKNKRSMTALDANKDNARLSKELVK
IVCDLKLKYAPDESSYRLKVNQEVEDFLNKVGFRSWLTKLADFKIAEPSAAKTHVVPEKT
EAKAVELWTLADLKKNIQGEDTIALTHICDDELNQHQCWRAMAVATSKKTGYIALSSEEA
KTLIDIIHEAHALVVCYQSKPILQLAMVAGVTPDFKYFDLAQAHFIINPEMRHDLATMVE
EFLGYKLPVAPKGQADLFGNQSEEEIKIQGERVEAILKLYPILRDKMKEMNVERPYDELD
IPLIKVLAAMELEGVSLDVPFYKNLENDFSRQIEEIEAEVVKAAGDKINLRSPKQVGELL
FEKLQLPVIRKTKTGYSTDAEVLNELAALKLNPIPELLLRYREIEKLLSTYVKALPTMVS
PDTKKIHTHFQPSNAATGRLSSDNPNLQNIPVRTENGRKLRKGFIPSPGRTLLSADYSQV
ELRLLAHFAQDKNMIDAFQNDRDIHRQTAAEVFDVPLEQVSKDMRNSAKAINFGLMYGQT
SFGLSQALHISQGDAKKYITNYFKKFHSVKSYLDGLKEKAENTGYAETLFGRKRNLPDIK
STNRQVKAMAERVAINSPIQGTAADIIKLAMINIQRILAERKLKSKMILQVHDELIFDVV
PEELEEMKVLVQEQMEGAVSLSVQLKVEMGTGSNWYDLK
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaattaattatcatcgatatttcgaattatatctttcgtgcttttttcgccatt
cgtccgcttcatgcaccagatggtactccggtaaacgctgtttatggtgtgctctcaatg
gttcacaacttgatagtgaaataccaaccgactcacatcatcgtggcgagagatacgaaa
gaaggatcatttcgcaaagtaatctacactgaatataaggcaaaccgctcagctccacct
gatgaattagttcctcagttcccgctggttgatgagcttattcaggttctgggtcttccg
gaaattaaagcacctaactatgaagcggatgatgtcattggatcggtcgccactcagtgg
aagaatgactttgatgaaatcctgatcgcttcaggtgataaagatcttatgcagttcgtg
gacgggccaattaagatcctcgataccatgaaagagaaaatttactcgcgtgaagacgtg
aaagacaagatgggagtgtatccagagcagatcgtggactacctttctcttattggtgac
tcttcagataacattccaggtgttgatggtatcggtcccaaaggtgctcagaatctaatt
gaagaattcggaactctggaaaacattctggaaaacattccttcaattaaaaacaagcgt
tcgatgacggcgctagatgccaataaagataatgctcgtctctcgaaagagctggtaaaa
atcgtttgtgatttaaaacttaaatatgctccagacgaatcttcttatcgcctaaaagtg
aatcaagaagtggaagactttcttaacaaggttggattccgttcgtggctaacaaaactt
gcagattttaagatcgcagaaccgtctgccgcaaaaactcacgttgttcctgagaaaact
gaggcaaaggctgttgaactttggactctggccgatttaaagaaaaacatccagggcgaa
gacacgatcgctctgactcatatctgtgatgatgaacttaaccagcaccaatgctggcgt
gccatggcggtggccacttctaaaaaaacgggctacatcgctttaagttctgaagaagct
aaaactctaattgatatcatccatgaggcccatgctctggtcgtttgttatcaatcaaaa
cctattctgcaactagcgatggtggcaggtgtaactccagactttaagtattttgatctc
gctcaggcccactttatcatcaatccggaaatgcgccatgatcttgccacaatggtggaa
gaatttttgggttacaaacttccagtcgctccaaagggacaggccgatctatttggaaat
cagagtgaagaagagataaaaattcagggcgaaagagtagaagcgattctgaaactctat
ccgattcttcgcgataagatgaaggaaatgaatgttgagcgtccttacgatgaactcgat
attccattaattaaagttcttgctgccatggaactcgagggtgtttctctcgatgtgcca
ttctataaaaacttagagaatgattttagccgtcagattgaggaaatcgaggccgaagtg
gtcaaggccgctggagacaaaatcaatcttcgttcgcctaaacaagtaggggagcttctt
tttgaaaagcttcaacttccagtcataagaaaaacgaaaaccggttactcaacggacgcc
gaagttttaaatgaacttgcggccctgaaactaaatcccattccggagcttctccttcgt
tatcgtgagatcgaaaaacttctttcgacttatgtgaaggcgctcccgacgatggtaagt
cctgacacaaagaagattcacactcactttcagccaagtaacgctgccactggacgttta
tcttcagacaatccaaaccttcagaacattccggtacgtactgagaatggaagaaaactt
cgtaagggctttattccttctcctgggagaacgcttctgtctgccgattactcgcaggta
gaacttcgtctgctggcgcatttcgcccaagacaaaaatatgatcgatgctttccagaat
gaccgtgatattcaccgtcagaccgcggcggaagtatttgatgtacctctcgagcaagtt
tcaaaagatatgcgtaatagtgctaaggcgatcaacttcggtctgatgtatggtcaaact
agctttggcctttcgcaggcacttcacatctcgcaaggtgatgcaaaaaaatacatcacg
aattattttaaaaaattccactcagtaaaaagttatcttgatggccttaaagagaaggcg
gagaacactggttacgctgagactttatttggaagaaaacgtaatctccctgatatcaaa
tcaactaaccgtcaggtcaaggcgatggcagaaagagtggcgatcaacagtccgattcaa
ggaactgcggccgacattattaaactcgccatgatcaacattcagcgcatcctggccgag
agaaagctcaaatctaagatgattcttcaggtgcacgatgaattgattttcgacgtggtt
cccgaggaactagaagaaatgaaagttctggtgcaggagcagatggaaggcgcggtatct
ctgagtgttcagctcaaggttgaaatgggcacgggctcaaactggtacgatcttaagtag
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integrated database retrieval system
