Peredibacter starrii: SOO65_04545
Help
Entry
SOO65_04545 CDS
T09598
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
psti
Peredibacter starrii
Brite
KEGG Orthology (KO) [BR:
psti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psti03021
]
SOO65_04545 (rapA)
Transcription machinery [BR:
psti03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
SOO65_04545 (rapA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
SNF2-rel_dom
Helicase_C
Tudor_RapA
ResIII
DEAD
Cas3-like_C_2
AAA_22
HD_3
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
WPU66007
UniProt:
A0AAX4HS01
LinkDB
All DBs
Position
909098..911830
Genome browser
AA seq
910 aa
AA seq
DB search
MKQFIIGQRWISESEPELGLGVIVEVEAKTVTCFFPAAKVDRRYGTQTAPLRRIKFVQGD
EIKAQDGTSFILENTTEAQGIVTYHGEGKTLSESLLADTLSFSKPEERLFAGNIDSNELF
KLRYDVLLNQRKLFISPIRGFSGPRLNIIPHQMYVANEVTKRSRPRVLLADEVGLGKTIE
AGLILHQLILTGRVERCLILVPDSLVYQWFVEMLKKFQMTFTTINHDSKLERGDRPFEDG
QLFVASLKYLMKEDWLLEQAVDSKWDLLVVDEAHQLRWSPDNASMEYDFVAAIAAGTPGV
LLLSGTPEILGLAGHYARLHLLDPNRFHDFNQFVEETTGYKPITDLANKLIKGSALTAND
KKLLKEKVGVDVEDKEKALQMLVDRHGTGRVYFRNTRKTMASYQEFFPKRVFNSYPIKIG
KTKNPEKKLFEQKAQWLAEFAEKHRDDKTLLICHDKEVVIDLEKALKDKTTAKVAFFHSG
MNLMNRDRQAAYFADPEGAQILLSTEIGSEGRNFEFARHLILFDLPKLPDLLEQRIGRLD
RIGQKNDIQIHVPYVEGSADELLMRWYHEGFNAFESSPRGGTELYATVRPELVELLQETE
EGTFPEKKFAAFLDKTQSIHQDIEKKLEEGQDQLVEINSFNHNKAMEFVKELKAMDDSND
LRDFMINLFNQLGVDVEDMNDPYTFFIRPGDNMYLPHFPGLESEGMQITFKRANALLKDD
TTFLTWDHPMVIGIMDFISSKEMGNSTIASWKTPSKEPFLFEGYFLLNCVTEKKLQIEKW
FPPTPLRVLLDSKMQDATQKMPKKFIDENVEPLDAEKRAQLKELPKDFIKECIKRGKELC
IARAKQYKEKFKDDMMKHMNAEIERLEALRKVNPTVSETEILLLKHNREKMVKAMDKAEL
SLDSLRIVIN
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atgaagcagttcatcataggccaacgctggatatcggaatctgagcctgaactagggctt
ggagttattgttgaggtagaagcgaagaccgttacttgtttttttccagcagctaaagtg
gaccgcagatacggcactcaaaccgcaccattacgcagaattaaatttgttcaaggggac
gagattaaggcccaggacggaacaagctttattctcgagaacacaactgaagcacaaggc
attgtgacttatcacggagaggggaagaccctttctgagtcattgcttgctgacacactt
tcgttttcgaaaccggaagagcgtttgttcgccggtaacattgattcgaatgaactgttc
aaacttcgttatgatgttcttttaaatcagcgaaaacttttcatttctcctattcgtggt
ttttctggaccacgattgaatatcattcctcaccaaatgtatgtggcgaatgaagtaaca
aaacgttctcgtcctcgcgtactcctggccgatgaagtgggtctgggtaaaaccattgag
gcgggtctaattctgcatcaattaattcttactggaagagttgaacgttgtttgattctt
gttcctgattcactggtttatcagtggttcgtggaaatgctgaagaagttccagatgact
ttcacaacgattaaccatgactcaaaattagagcgtggggaccgtccgtttgaagatggt
cagttgtttgtggcatctttgaaatatctcatgaaggaagactggttattagaacaagcg
gtggattcgaagtgggatctcctggttgtggatgaggcccatcagcttcgttggtcacca
gataatgcttcgatggaatatgattttgtggcggcgattgcggcgggaactccgggtgtg
cttcttctttctggtacgccggaaatcttgggtctggccggacactatgctcgacttcat
cttcttgatccaaaccgtttccacgacttcaatcaattcgtggaagagaccacgggctat
aagccaatcactgatctcgcgaacaaactcataaagggatcggcccttactgccaacgat
aaaaaacttttgaaagaaaaagttggagtcgatgtagaggacaaagagaaggcgctacaa
atgctcgtggatcgtcatggaaccggtcgcgtgtattttagaaatactcgtaagaccatg
gcgagctatcaggagtttttcccgaagcgtgtgtttaactcttatccgattaagatcgga
aagacgaagaaccctgagaaaaaactatttgaacaaaaggcccagtggcttgctgagttt
gctgaaaagcacagagacgataagacccttcttatctgtcacgataaagaagtggtgatt
gatctcgaaaaggcccttaaagataaaaccacggcgaaagtggcgttcttccattcggga
atgaacctcatgaaccgtgaccgtcaggcggcgtattttgctgatcctgaaggtgctcag
attcttttaagtacggaaatcggatcagaaggtcgtaacttcgagttcgctcgtcatttg
attcttttcgatctaccgaaacttcctgatcttcttgagcagcgtattggtcgtctcgat
cgtattggtcagaagaatgatatccagattcatgtgccatatgttgaaggttcagcggat
gagttacttatgcgttggtatcacgagggctttaatgctttcgaatcttctccacgtggg
ggaactgagctttatgcgacagtgagaccagagctagtggaacttcttcaggaaacagaa
gaaggaactttcccagagaagaaatttgcggcgtttttagataaaactcaatccatccat
caggacattgagaagaaacttgaagaaggtcaggatcagctagttgaaatcaactcattt
aatcacaataaggcgatggagttcgtgaaagaacttaaggccatggatgattcaaatgat
cttcgtgatttcatgattaatctatttaaccagctaggagtggacgttgaggacatgaat
gatccttatacgtttttcatcagacctggtgacaacatgtatcttcctcacttccctggg
cttgagagtgaaggaatgcagattacttttaaacgtgccaatgcccttttaaaagatgat
acgactttccttacctgggaccatccgatggtgatcggtattatggatttcatttcttcg
aaagagatggggaactcaaccatcgcgagctggaagactccttcgaaagagccattcctg
tttgaaggttacttcttacttaattgtgtgactgagaagaagcttcaaattgagaaatgg
ttcccgccaactccgcttcgtgtcctcttagactcgaaaatgcaggacgcgactcagaag
atgccgaaaaagttcatcgatgagaacgttgagccacttgatgctgaaaaacgtgctcaa
ctaaaagaacttccgaaagacttcatcaaagaatgtatcaaacgcggaaaagagctgtgt
attgctcgcgcgaaacaatacaaggaaaagtttaaggacgatatgatgaaacacatgaat
gctgagattgaaagattggaggcactcagaaaggttaaccctacggtttcagaaactgaa
atcctgttactaaaacataaccgcgaaaaaatggtgaaggcgatggataaggccgagctt
tctctggactcccttcgcatcgttattaattaa
DBGET
integrated database retrieval system
