Peredibacter starrii: SOO65_04955
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Entry
SOO65_04955 CDS
T09598
Name
(GenBank) ATP-binding cassette domain-containing protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
psti
Peredibacter starrii
Pathway
psti02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
psti00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SOO65_04955
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psti02000
]
SOO65_04955
Transporters [BR:
psti02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
SOO65_04955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_23
SMC_N
NB-ARC
KAP_NTPase
AAA_15
AAA_22
T2SSE
AAA_18
AAA_29
NACHT
AAA
AAA_30
Rad17
cobW
AAA_13
RNA_helicase
ATPase_2
MobB
nSTAND3
AAA_16
AAA_24
AAA_28
RsgA_GTPase
IstB_IS21
DO-GTPase2
Motif
Other DBs
NCBI-ProteinID:
WPU66089
LinkDB
All DBs
Position
complement(997807..998772)
Genome browser
AA seq
321 aa
AA seq
DB search
MIRVNNLSKQFDSRGIAGLHALNFTLNKGIVMGIMGPNGSGKTTLLKILSGQLNSDQGNF
ETDGSVSLFPTHEILTDMNVQKFLISKVTIDVDDEKKIQLARDLADTFEFTFQLRQNLFQ
LSSGQRQKVLLAAELINRPALLLMDEPFTHLDPFTRRDILNGLFQFIRQQGITVLWVTHE
LEEALKYSDIVGLMNFGRLEQLGTPLSLLRNPRNLFVAQFMGYQNFIPVKFEQGVAETPW
GKWNASLANASEGIMVIPDNAWKMNEGLEAQIEESYGTRQGIEHRLRFDGRQLVLKTMPT
VDVQEKVKIMPIWEECFLIPL
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgatcagagtaaataatctttctaaacaattcgattcacgcggtatcgcgggccttcat
gctcttaacttcaccctgaataagggaattgttatgggaattatgggaccgaatggaagt
ggtaaaaccacgcttcttaaaatcctttcaggccaactgaattctgatcaggggaatttt
gagactgatggttcagtatccttatttccgactcacgaaatccttacggatatgaacgtt
caaaagtttttgatcagtaaggtgactattgatgttgatgacgagaagaagattcaactg
gcccgcgaccttgcggacacttttgagtttactttccaactccgtcagaatcttttccag
ctttcaagcggacaaagacaaaaggtcctcttagcggcagagctgattaatcgtcctgct
cttcttttaatggatgaaccattcacgcatctggatccattcactcgtcgagatatctta
aatggtctgtttcaatttatccgtcagcaagggatcactgtcctttgggtgactcatgaa
ctagaagaggccctgaagtactctgacatcgtggggcttatgaactttggtcgcctggaa
caactgggcactccactttcgcttttaagaaatccaagaaatctcttcgtggcccaattc
atgggttaccagaattttatcccagtgaagtttgaacaaggtgttgcggaaactccttgg
ggtaaatggaacgcgtctcttgcaaatgccagcgaaggcattatggtgattcctgacaac
gcctggaagatgaatgaaggtcttgaagctcagatcgaagaaagctacggcactcgtcag
ggtattgagcaccgtcttcgatttgatggccgccagttagtgcttaaaactatgcctacc
gtggacgttcaagagaaagtaaaaatcatgcccatctgggaagagtgctttctgattccg
ctttag
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