Peredibacter starrii: SOO65_05705
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Entry
SOO65_05705 CDS
T09598
Name
(GenBank) bifunctional oligoribonuclease/PAP phosphatase NrnA
KO
K06881
bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:
3.1.3.7
3.1.13.3
]
Organism
psti
Peredibacter starrii
Pathway
psti00920
Sulfur metabolism
psti01100
Metabolic pathways
psti01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
psti00001
]
09100 Metabolism
09102 Energy metabolism
00920 Sulfur metabolism
SOO65_05705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psti03400
]
SOO65_05705
Enzymes [BR:
psti01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.7 3'(2'),5'-bisphosphate nucleotidase
SOO65_05705
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.3 oligonucleotidase
SOO65_05705
DNA repair and recombination proteins [BR:
psti03400
]
Prokaryotic type
Other factors with a suspected DNA repair function
Others
SOO65_05705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
ZT_dimer
Motif
Other DBs
NCBI-ProteinID:
WPU66236
LinkDB
All DBs
Position
complement(1139960..1140964)
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AA seq
334 aa
AA seq
DB search
MTILDTFKSRIQVAERILITTHEYPDADGIGSEISLCLALREYGKKVYCVNEEPLLERYR
YLDQDKVVYGFKDFFAKHPDFKPDLMIVVDTNTKLRAGHQICHYIGDAIPVLYIDHHPCR
GRDLSDHCIDVTAAATGQMIGEMIESLGVKFTKKIALPIYTSIIIDTSSFRYPTVSASTH
KLVAKLMDTGINPPEAYNGIYGTKRVHHMHLLASILNTASTNKDETIAWMLLKKEDIDKY
AGDVEDTHAFINNLLVLNNIKVACMFRDDGDHIKMSLRSSGEYDVGTIALALGGGGHSHS
AATILNREPGETTEHVIDRAIKKVEEALKKMSVT
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgaccattttagatacttttaagtcaagaattcaagtagcagagcggattctcattact
acgcatgagtatcctgatgctgacggcattggatcagagatttcactctgcctcgctcta
cgcgagtatggaaagaaagtttactgtgtcaatgaagagcctcttctggagcgctatcgt
taccttgaccaagataaggtcgtttacggtttcaaagatttctttgcgaaacatccagat
ttcaaaccagatttaatgattgtggttgatacgaacacaaaacttcgtgctggccatcaa
atctgtcattacattggtgatgccattcctgtgctctatatcgatcaccacccttgtcgc
ggtcgtgatttgtccgatcattgtattgatgtgaccgctgcggccacaggtcaaatgatt
ggtgagatgattgagtctttgggagttaagttcactaagaagatcgcacttccgatttat
acttcgatcattattgataccagctctttcagataccccactgtttctgcctcaactcac
aaattggtggcaaaactgatggacactggaattaatcctccagaggcctacaacggtatt
tatggtacgaaacgcgttcatcatatgcatttacttgcgagtattttgaataccgcttct
accaataaagatgaaaccatcgcctggatgcttcttaaaaaagaagacattgataaatac
gcaggtgacgtggaagacactcacgctttcatcaataacttacttgttttgaataacatc
aaagttgcttgtatgttccgtgatgatggtgaccacatcaagatgagccttcgctcttcg
ggtgaatatgatgtgggaacgattgcccttgccttaggtggcggaggtcactcgcattcg
gccgcgactattctgaatcgtgaaccaggtgaaaccaccgaacacgtgattgaccgagct
ataaaaaaagtcgaagaagccctgaaaaagatgtctgttacttaa
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