Peredibacter starrii: SOO65_05930
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Entry
SOO65_05930 CDS
T09598
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
psti
Peredibacter starrii
Pathway
psti03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
psti00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SOO65_05930 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psti03400
]
SOO65_05930 (uvrB)
DNA repair and recombination proteins [BR:
psti03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SOO65_05930 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SOO65_05930 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
ResIII
UvrB
DEAD
UVR
AAA_30
AAA_22
UB2H
nSTAND_NTPase5
Motif
Other DBs
NCBI-ProteinID:
WPU66281
UniProt:
A0AAX4HSU2
LinkDB
All DBs
Position
1182826..1184826
Genome browser
AA seq
666 aa
AA seq
DB search
MTGKFQLESAFKPMGDQPQAIESIANNFQKKEKFQTLLGVTGSGKTFAMANVIQRLGKKT
LILAPNKTLAAQLFAEFKEFFPNNAVEYFVSYYDYYQPEAYVPGSDTYIEKDSAINDEIE
KLRHSCTRSLFAREDVIVVASVSCIYGIGAPDEYFNQRIMLLNQDKLDRDEFLRRLVDIQ
YQRNDTDFHRGTFRVRGDIVEVFPAYEDSQVVRVEFFDDVVDGIFLVDPLRGKVIQPLQR
VDIYPKSHYVVGKDKMKSAIANIKVELRERLNELQEQRKLVEEQRLSQRTLLDLEMMEEM
GFCPGIENYSRHLAGNAPGEPPYTLLDYFKKDFLLIVDESHVSIPQVGGMYKGDRARKQN
LVDFGFRLPSALDNRPLNFPEFESKLDQVLFVSATPADYELQKTNGEYAEQIIRPTGLLD
PVIEFKDAKNQVDDMLVEAKKVIANGYRVLITTLTKRLAEELTDFYKGVGMRIKYLHSDI
DTLERMEILRDLRLGEFDILVGINLLREGLDIPEVALVGILDADKEGFLRSTRSLIQTIG
RAARNSEGRVILYGFKKTPSIEEAMKVTAERRIKQQAYNEKHGQTPKTVAKKVSGGVIEV
LRGAKKSDKKARVKEISEQRLSPEAIDAKIVELKQLMKEAVKDLQFEEAAKLRDEIKKLS
ELRFML
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgacaggtaaatttcaattagagtctgctttcaaaccgatgggggaccaaccccaggcg
attgaatctattgctaataattttcagaaaaaagagaagtttcagacccttttaggggta
acgggatcaggtaagaccttcgcgatggcgaatgttatccagcgattgggtaagaaaacc
ttaattctggcccccaataagaccctggccgcccagctatttgctgagtttaaagagttc
tttcccaacaatgccgtagagtatttcgtttcctattacgattactatcagcccgaggcc
tatgtgcctggctcagatacctatattgagaaagattccgccattaacgacgaaattgag
aagcttcgtcactcatgtacccgttcgctgtttgctcgcgaagacgtgatcgtagtcgct
tcagtcagctgtatttacggtattggtgctcctgatgaatatttcaatcagagaatcatg
ctcttaaatcaagacaagctcgatcgcgacgaatttcttcgtcgcctggttgatattcag
taccaaagaaatgataccgatttccaccgtggtaccttccgtgttcgcggtgatattgta
gaagttttcccggcatacgaagattctcaagtcgtacgagttgaattctttgatgatgtt
gtcgatgggattttcttggtggatcccttgcggggcaaagtgattcaacctcttcaacgc
gttgatatttatccgaagtctcactatgtggtaggcaaagataagatgaagtcggcgatt
gcaaatattaaagttgagttgcgtgaaagattgaacgaacttcaagagcagagaaaactt
gttgaagaacagcgtctctctcagagaaccttacttgatctagagatgatggaagagatg
ggtttttgtcctggtattgaaaactattctcgccatcttgccggaaatgctccgggtgag
ccaccttatacactcttagattatttcaaaaaggatttccttctcattgtggatgagtct
cacgtctcgattccgcaagtaggaggtatgtataaaggagaccgcgcgagaaaacaaaat
ctcgtagatttcggtttccgtcttccaagtgctcttgataaccgtccgctaaactttcct
gaatttgagagtaagttggatcaggtactatttgtctcagccacaccggccgattatgag
cttcagaaaacgaacggtgaatatgctgagcagatcattcgtccgactggtctcttagat
ccggtcattgaatttaaagatgccaagaaccaagtggatgacatgttagtcgaagcgaag
aaagtcatcgctaatggttaccgtgtactcattaccactctgacgaaacgtctggccgaa
gagctaacggatttctataagggtgtaggaatgaggatcaaatatcttcactctgacatt
gatactcttgaacgaatggagatcctgcgtgatcttcgactcggagaattcgatatcctg
gtcgggattaacctccttcgtgagggtctggatattccagaggtcgccttagtgggaatt
cttgatgccgataaagaaggcttccttcgatcgacccgttctctcatccaaacgattggt
cgagcggcccgaaactcagaaggacgagttattctctacggctttaaaaagactccaagc
atcgaagaggccatgaaagtaacggccgaacgtcgaatcaagcagcaggcctataacgaa
aagcacggccagactcctaaaactgtcgctaaaaaggtcagtgggggcgtgattgaggtt
cttcgaggtgccaagaagtccgacaagaaagcacgggttaaagaaatttctgagcaaaga
ctttctccagaagcaattgatgctaaaattgtagaattaaaacagctcatgaaagaagcg
gtcaaagacctacagtttgaagaggccgccaaacttcgtgacgaaattaagaagctttct
gaattaaggtttatgctatga
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