KEGG   Peredibacter starrii: SOO65_10055
Entry
SOO65_10055       CDS       T09598                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
psti  Peredibacter starrii
Pathway
psti03030  DNA replication
psti03430  Mismatch repair
psti03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:psti00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    SOO65_10055
   03430 Mismatch repair
    SOO65_10055
   03440 Homologous recombination
    SOO65_10055
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:psti03032]
    SOO65_10055
   03400 DNA repair and recombination proteins [BR:psti03400]
    SOO65_10055
Enzymes [BR:psti01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     SOO65_10055
DNA replication proteins [BR:psti03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     SOO65_10055
DNA repair and recombination proteins [BR:psti03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     SOO65_10055
SSDB
Motif
Pfam: RNase_T RNase_H_2 DEDDh_C DNA_pol_A_exo1
Other DBs
NCBI-ProteinID: WPU67096
UniProt: A0AAX4HVR4
LinkDB
Position
1982710..1983987
AA seq 425 aa
MGPRRYVICDIEATGLDEDRDLIEIALITFEDDKVIEVYDTLINPLRPIPEFISNLTMIS
NRELETAPKFYEVADAIRMRLEGAVFVSHNTEFDLGLLRKKYKEMGQELKVKNFCTLKVA
QHEIPGLRNYNLDALCSFFGIKIEERHRAVGDAKATLGLFKELLQLRLKTYTKILFLPHH
EKMLKKIPSKAGLLYFKDPNGKVLRFEASFNMEKTARELLEVKADNRDLLMKVEMVEGEV
TGSALIAEFKKLLFHPYQPHWMIVTQELDTGEKFFKIRPYKKGLNGLWYFKEYLDAKKKL
RTLEHGLKDQTFAYRDSGKSKEEIVQHNRKVDNFSKEARFPNDNLVIVGEGRTMGEKSLI
LVRDNHVVGYGYTEASEDEIYAGPEQYLTRRFFQHLGADLATRKYIRVLKNLRNKTESWR
SLSLS
NT seq 1278 nt   +upstreamnt  +downstreamnt
atgggcccgcgacgttatgtgatctgcgacattgaggcaacagggttagacgaagaccga
gatctgattgagatcgcgctgattacttttgaagacgacaaagtgatcgaggtctacgac
actttaatcaatcctctgcgcccgattcccgagtttatttcaaatctcaccatgatttct
aaccgcgagttagaaaccgccccgaaattttatgaagtggccgatgccattcgcatgcgt
ttagagggagcggtgtttgtttctcacaatacggaatttgatctgggacttctccggaaa
aaatataaggagatgggacaggagttgaaggtaaagaacttttgtaccttgaaagttgcg
caacacgagattccagggcttcggaattataatctggatgctctttgtagtttcttcgga
attaagattgaagaacgccatcgtgcggttggtgacgctaaagcgactctgggtcttttt
aaagagctcttacagttgcgcttaaagacctacaccaaaattttatttcttcctcatcat
gagaagatgctgaagaagattccttcgaaagcagggctattatatttcaaagatccgaat
ggaaaggtccttcgttttgaagcctcttttaatatggagaagaccgctcgtgagttgtta
gaggtcaaggccgataatcgggacctccttatgaaagttgaaatggtggaaggtgaagtc
acaggttcagcgttgattgctgaatttaagaagctgctctttcatccttatcaacctcac
tggatgattgtgacccaagagttagatacaggtgagaagttctttaagattcgcccttat
aaaaaaggtttgaatggtttgtggtattttaaagaatacctcgatgcgaagaagaagctc
agaactttagagcatggtttaaaagaccagacctttgcttatcgcgatagtggaaagtct
aaggaagaaattgttcagcataaccggaaggtcgataatttctctaaagaggcgcgcttt
ccgaatgataatttagtgattgttggcgaaggtcgtacgatgggtgagaaatccctgatc
ctcgtcagagacaaccatgtagtgggttatggttatactgaagcgtcggaagatgaaatc
tatgcggggcccgaacagtatctcacgcgaagattctttcagcatctgggcgctgatctc
gcgacgagaaaatatattcgagtcttaaagaatttaaggaataaaacagagtcatggcga
agtttatctttatcttga

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